RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 DIS3L2Q8IYB7 885 aaKnown RBP13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 FBXO18Q8NFZ0 1043 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 LMBR1Q8WVP7 490 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 GLG1Q92896 1179 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 ATP6V0A1Q93050 837 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 GJA10Q969M2 543 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 SCLYQ96I15 445 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 KCNMB3Q9NPA1 279 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 NOD1Q9Y239 953 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 MAFBQ9Y5Q3 323 aaPredicted RBP13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 DDX39AO00148 427 aaKnown RBP13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 GNAT1P11488 350 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 INSRRP14616 1297 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 SELPP16109 830 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 GCFC2P16383 781 aaKnown RBP13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 MARK3P27448 753 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 RFC2P35250 354 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 LETM2Q2VYF4 491 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 SWSAP1Q6NVH7 229 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 MIS18BP1Q6P0N0 1132 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 SMAP1Q8IYB5 467 aaPredicted RBP13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 RETREG2Q8NC44 543 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 HERVK_113Q902F9 699 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 HAS1Q92839 578 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 C8orf76Q96K31 380 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 AZI2Q9H6S1 392 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 BRMS1Q9HCU9 246 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 DDX25Q9UHL0 483 aaKnown RBP13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 PCDHA10Q9Y5I2 948 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 MYH7BA7E2Y1 1941 aa13.3□□□□□ -0.28
HMGXB3-203ENST00000510472 RRN3P2A6NIE6 340 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 WNT7AO00755 349 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 TBX3O15119 743 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 CAND2O75155 1236 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 FGBP02675 491 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 CXCL10P02778 98 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 TRIM29Q14134 588 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 MBTPS1Q14703 1052 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 GRIK4Q16099 956 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 ZNF618Q5T7W0 954 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 GPR153Q6NV75 609 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 RPUSD2Q8IZ73 545 aaKnown RBP13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 CCDC155Q8N6L0 562 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 ATP8B4Q8TF62 1192 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 LRCH3Q96II8 777 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 FAM20AQ96MK3 541 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 UNC45AQ9H3U1 944 aa13.29□□□□□ -0.28
HMGXB3-203ENST00000510472 POTEB3A0JP26 581 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 WDR64B1ANS9 1081 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 ZBTB42B2RXF5 422 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 GAS7O60861 476 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 NBNO60934 754 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 PARNO95453 639 aaKnown RBP13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 PSAPP07602 524 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 PFKMP08237 780 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 SFNP31947 248 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 FOSBP53539 338 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 GUCY1B3Q02153 619 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 PPFIA1Q13136 1202 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 CUL4AQ13619 759 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 FAM26DQ5JW98 314 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 LRCH2Q5VUJ6 765 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 POTEBQ6S5H4 581 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 LRRC8DQ7L1W4 858 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 RDM1Q8NG50 284 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 NAP1L4Q99733 375 aaKnown RBP13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 TEKT3Q9BXF9 490 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 FOXP1Q9H334 677 aaPredicted RBP13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 ZNF302Q9NR11 478 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 DISC1Q9NRI5 854 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 CXXC1Q9P0U4 656 aaPredicted RBP13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 VAV3Q9UKW4 847 aa13.28□□□□□ -0.28
HMGXB3-203ENST00000510472 BACH1O14867 736 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 ZNF862O60290 1169 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 HBP1O60381 514 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 CCNT1O60563 726 aaKnown RBP13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 STBD1O95210 358 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 U2AF2P26368 475 aaKnown RBP eCLIP13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 JAK3P52333 1124 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 SPIRE1Q08AE8 756 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 PPP2R5CQ13362 524 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 FAM160B1Q5W0V3 765 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 TAF2Q6P1X5 1199 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 PDXDC2PQ6P474 469 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 RUFY4Q6ZNE9 571 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 TNPO1Q92973 898 aaKnown RBP13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 RNPC3Q96LT9 517 aaKnown RBP13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 OSBPL7Q9BZF2 842 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 IGSF9BQ9UPX0 1349 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 LAMA2P24043 3122 aaKnown RBP13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 SZT2Q5T011 3432 aa13.27□□□□□ -0.29
HMGXB3-203ENST00000510472 RSPH10B2B2RC85 870 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 RBAK-RBAKDNI3L0D1 243 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 EML1O00423 815 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 RSPH10BP0C881 870 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 THPOP40225 353 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 SMAD3P84022 425 aaKnown RBP13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 TCTN1Q2MV58 587 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms