RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 SYCE3A1L190 88 aa2.58□□□□□ -2
CAST-226ENST00000509529 NOTOA8MTQ0 251 aa2.58□□□□□ -2
CAST-226ENST00000509529 POLR3GO15318 223 aaPredicted RBP2.58□□□□□ -2
CAST-226ENST00000509529 PENKP01210 267 aaPredicted RBP2.58□□□□□ -2
CAST-226ENST00000509529 CCDC192P0DO97 292 aa2.58□□□□□ -2
CAST-226ENST00000509529 IDO1P14902 403 aa2.58□□□□□ -2
CAST-226ENST00000509529 YY1P25490 414 aa2.58□□□□□ -2
CAST-226ENST00000509529 ELF1P32519 619 aa2.58□□□□□ -2
CAST-226ENST00000509529 TNNT3P45378 269 aaPredicted RBP2.58□□□□□ -2
CAST-226ENST00000509529 CDR1P51861 262 aa2.58□□□□□ -2
CAST-226ENST00000509529 WDR43Q15061 677 aaKnown RBP eCLIP2.58□□□□□ -2
CAST-226ENST00000509529 C1QTNF12Q5T7M4 302 aa2.58□□□□□ -2
CAST-226ENST00000509529 TTC22Q5TAA0 569 aa2.58□□□□□ -2
CAST-226ENST00000509529 WWC2Q6AWC2 1192 aa2.58□□□□□ -2
CAST-226ENST00000509529 ZNF572Q7Z3I7 529 aaPredicted RBP2.58□□□□□ -2
CAST-226ENST00000509529 AEBP1Q8IUX7 1158 aa2.58□□□□□ -2
CAST-226ENST00000509529 MFN1Q8IWA4 741 aa2.58□□□□□ -2
CAST-226ENST00000509529 LRRC8AQ8IWT6 810 aa2.58□□□□□ -2
CAST-226ENST00000509529 CCDC191Q8NCU4 936 aa2.58□□□□□ -2
CAST-226ENST00000509529 ATL2Q8NHH9 583 aa2.58□□□□□ -2
CAST-226ENST00000509529 IRGQQ8WZA9 623 aa2.58□□□□□ -2
CAST-226ENST00000509529 DHX38Q92620 1227 aaKnown RBP2.58□□□□□ -2
CAST-226ENST00000509529 SMARCE1Q969G3 411 aa2.58□□□□□ -2
CAST-226ENST00000509529 HOOK2Q96ED9 719 aa2.58□□□□□ -2
CAST-226ENST00000509529 NECAB3Q96P71 396 aaPredicted RBP2.58□□□□□ -2
CAST-226ENST00000509529 PRAM1Q96QH2 718 aa2.58□□□□□ -2
CAST-226ENST00000509529 FAM129BQ96TA1 746 aa2.58□□□□□ -2
CAST-226ENST00000509529 SYNPO2Q9UMS6 1093 aa2.58□□□□□ -2
CAST-226ENST00000509529 RPS6KL1Q9Y6S9 549 aa2.58□□□□□ -2
CAST-226ENST00000509529 ARHGAP5Q13017 1502 aa2.58□□□□□ -2
CAST-226ENST00000509529 USP42Q9H9J4 1324 aaKnown RBP2.58□□□□□ -2
CAST-226ENST00000509529 RGPD1P0DJD0 1748 aa2.58□□□□□ -2
CAST-226ENST00000509529 TDRD9Q8NDG6 1382 aaKnown RBP2.58□□□□□ -2
CAST-226ENST00000509529 HRKO00198 91 aa2.58□□□□□ -2
CAST-226ENST00000509529 ENC1O14682 589 aa2.58□□□□□ -2
CAST-226ENST00000509529 RASSF9O75901 435 aa2.58□□□□□ -2
CAST-226ENST00000509529 RLBP1P12271 317 aa2.58□□□□□ -2
CAST-226ENST00000509529 XRCC5P13010 732 aaKnown RBP2.58□□□□□ -2
CAST-226ENST00000509529 PECAM1P16284 738 aaPredicted RBP2.58□□□□□ -2
CAST-226ENST00000509529 TNFRSF8P28908 595 aa2.58□□□□□ -2
CAST-226ENST00000509529 LTKP29376 864 aa2.58□□□□□ -2
CAST-226ENST00000509529 MAGEA10P43363 369 aaPredicted RBP2.58□□□□□ -2
CAST-226ENST00000509529 RPS6KA3P51812 740 aa2.58□□□□□ -2
CAST-226ENST00000509529 ADAM17P78536 824 aa2.58□□□□□ -2
CAST-226ENST00000509529 CHRNEQ04844 493 aa2.58□□□□□ -2
CAST-226ENST00000509529 DNAJC21Q5F1R6 531 aaKnown RBP2.58□□□□□ -2
CAST-226ENST00000509529 NUGGCQ68CJ6 796 aa2.58□□□□□ -2
CAST-226ENST00000509529 LLGL2Q6P1M3 1020 aa2.58□□□□□ -2
CAST-226ENST00000509529 KCNV1Q6PIU1 500 aa2.58□□□□□ -2
CAST-226ENST00000509529 TMCO3Q6UWJ1 677 aa2.58□□□□□ -2
CAST-226ENST00000509529 ATF7IPQ6VMQ6 1270 aa2.58□□□□□ -2
CAST-226ENST00000509529 TTLL7Q6ZT98 887 aa2.58□□□□□ -2
CAST-226ENST00000509529 SESTD1Q86VW0 696 aa2.58□□□□□ -2
CAST-226ENST00000509529 ANKRD44Q8N8A2 993 aa2.58□□□□□ -2
CAST-226ENST00000509529 OR8K1Q8NGG5 319 aa2.58□□□□□ -2
CAST-226ENST00000509529 ZNF483Q8TF39 744 aaPredicted RBP2.58□□□□□ -2
CAST-226ENST00000509529 PLPPR2Q96GM1 343 aa2.58□□□□□ -2
CAST-226ENST00000509529 TM6SF1Q9BZW5 370 aa2.58□□□□□ -2
CAST-226ENST00000509529 WNT10AQ9GZT5 417 aa2.58□□□□□ -2
CAST-226ENST00000509529 GBP3Q9H0R5 595 aa2.58□□□□□ -2
CAST-226ENST00000509529 TRIT1Q9H3H1 467 aaKnown RBP2.58□□□□□ -2
CAST-226ENST00000509529 ABCF2Q9UG63 623 aa2.58□□□□□ -2
CAST-226ENST00000509529 CNOT11Q9UKZ1 510 aaKnown RBP2.58□□□□□ -2
CAST-226ENST00000509529 ZNF215Q9UL58 517 aaPredicted RBP2.58□□□□□ -2
CAST-226ENST00000509529 SMC3Q9UQE7 1217 aa2.58□□□□□ -2
CAST-226ENST00000509529 NEO1Q92859 1461 aa2.58□□□□□ -2
CAST-226ENST00000509529 RIMBP3Q9UFD9 1639 aa2.58□□□□□ -2
CAST-226ENST00000509529 NFAT5O94916 1531 aa2.58□□□□□ -2
CAST-226ENST00000509529 TARSL2A2RTX5 802 aaKnown RBP2.57□□□□□ -2
CAST-226ENST00000509529 GPR182O15218 404 aa2.57□□□□□ -2
CAST-226ENST00000509529 AP5Z1O43299 807 aa2.57□□□□□ -2
CAST-226ENST00000509529 MGRN1O60291 552 aa2.57□□□□□ -2
CAST-226ENST00000509529 BCAR3O75815 825 aa2.57□□□□□ -2
CAST-226ENST00000509529 PRPF6O94906 941 aaKnown RBP2.57□□□□□ -2
CAST-226ENST00000509529 CST3P01034 146 aaPredicted RBP2.57□□□□□ -2
CAST-226ENST00000509529 SDHBP21912 280 aa2.57□□□□□ -2
CAST-226ENST00000509529 MCM3P25205 808 aa2.57□□□□□ -2
CAST-226ENST00000509529 GCLCP48506 637 aaPredicted RBP2.57□□□□□ -2
CAST-226ENST00000509529 RGS19P49795 217 aa2.57□□□□□ -2
CAST-226ENST00000509529 ETF1P62495 437 aaKnown RBP2.57□□□□□ -2
CAST-226ENST00000509529 ITIH3Q06033 890 aa2.57□□□□□ -2
CAST-226ENST00000509529 OS9Q13438 667 aaPredicted RBP2.57□□□□□ -2
CAST-226ENST00000509529 DCTN1Q14203 1278 aa2.57□□□□□ -2
CAST-226ENST00000509529 LACTB2Q53H82 288 aaPredicted RBP2.57□□□□□ -2
CAST-226ENST00000509529 TSPYL5Q86VY4 417 aaPredicted RBP2.57□□□□□ -2
CAST-226ENST00000509529 SPPL2CQ8IUH8 684 aa2.57□□□□□ -2
CAST-226ENST00000509529 EIF1ADQ8N9N8 165 aaKnown RBP2.57□□□□□ -2
CAST-226ENST00000509529 MIGA1Q8NAN2 632 aa2.57□□□□□ -2
CAST-226ENST00000509529 CCHCR1Q8TD31 782 aa2.57□□□□□ -2
CAST-226ENST00000509529 MZB1Q8WU39 189 aa2.57□□□□□ -2
CAST-226ENST00000509529 BICD1Q96G01 975 aa2.57□□□□□ -2
CAST-226ENST00000509529 PWWP2AQ96N64 755 aa2.57□□□□□ -2
CAST-226ENST00000509529 BAG1Q99933 345 aaPredicted RBP2.57□□□□□ -2
CAST-226ENST00000509529 DPH2Q9BQC3 489 aaPredicted RBP2.57□□□□□ -2
CAST-226ENST00000509529 DCTPP1Q9H773 170 aa2.57□□□□□ -2
CAST-226ENST00000509529 ACTR5Q9H9F9 607 aaPredicted RBP2.57□□□□□ -2
CAST-226ENST00000509529 STAP2Q9UGK3 403 aa2.57□□□□□ -2
CAST-226ENST00000509529 LCMT1Q9UIC8 334 aa2.57□□□□□ -2
CAST-226ENST00000509529 ADAM21Q9UKJ8 722 aa2.57□□□□□ -2
CAST-226ENST00000509529 WDR17Q8IZU2 1322 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms