RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 CPLX3Q8WVH0 158 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 CPA5Q8WXQ8 436 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 SHDQ96IW2 340 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 CDH19Q9H159 772 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 IFT122Q9HBG6 1241 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 FBLN5Q9UBX5 448 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 MCM8Q9UJA3 840 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 NOB1Q9ULX3 412 aaKnown RBP5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 PRSS47A8MTI9 375 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 PRRT4C9JH25 899 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 STXBP3O00186 592 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 CBFA2T2O43439 604 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 DHX16O60231 1041 aaKnown RBP5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 DIAPH1O60610 1272 aaKnown RBP5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 TCEA3O75764 348 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 RAPGEF3O95398 923 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 FSHBP01225 129 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 IFIT2P09913 472 aaKnown RBP5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 RRM1P23921 792 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 NEK3P51956 506 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 CCDC96Q2M329 555 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 SLC4A8Q2Y0W8 1093 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 ALFQ53S48 1182 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 CPZQ66K79 652 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 HEATR6Q6AI08 1181 aaKnown RBP5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 CC2D1AQ6P1N0 951 aaPredicted RBP5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 RNF180Q86T96 592 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 DGKHQ86XP1 1220 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 SMAP1Q8IYB5 467 aaPredicted RBP5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 SYNPOQ8N3V7 929 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 NETO2Q8NC67 525 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 RBBP8NLQ8NC74 664 aaPredicted RBP5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 ADAMTS17Q8TE56 1095 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 ERP27Q96DN0 273 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 MFSD3Q96ES6 412 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 FGD4Q96M96 766 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 CRBNQ96SW2 442 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 SYT3Q9BQG1 590 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 CLIC5Q9NZA1 410 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 WHRNQ9P202 907 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 NAP1L2Q9ULW6 460 aaPredicted RBP5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 SIT1Q9Y3P8 196 aa5.28□□□□□ -1.56
SMARCA5-202ENST00000508573 KDM2BQ8NHM5 1336 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 PIP5K1CO60331 668 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 HIP1RO75146 1068 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 PPM1BO75688 479 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 FUCA1P04066 466 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 NTRK1P04629 796 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 PAMP19021 973 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 SERPINB3P29508 390 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 KIAA2012Q0VF49 1180 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 RGL3Q3MIN7 710 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 FAM102BQ5T8I3 360 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 NXNQ6DKJ4 435 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 CHST13Q8NET6 341 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 NINJ1Q92982 152 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 C8orf49Q96NF6 230 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 HAUS7Q99871 368 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 LRRC27Q9C0I9 530 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 POLG2Q9UHN1 485 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 PFDN2Q9UHV9 154 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 NOL7Q9UMY1 257 aaKnown RBP5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 PCDHB10Q9UN67 800 aa5.27□□□□□ -1.57
SMARCA5-202ENST00000508573 ZNF536O15090 1300 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 NPHP3-ACAD11A0A0J9YXS1 232 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 KLRG2A4D1S0 409 aaPredicted RBP5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 GOLGA6CA6NDK9 693 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 GOLGA6BA6NDN3 693 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 NPHS1O60500 1241 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 GOLGA6DP0CG33 693 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 CYP2C8P10632 490 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 TRIM27P14373 513 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 TNFRSF1AP19438 455 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 HALP42357 657 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 CASP2P42575 452 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 HTR3AP46098 478 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 GEMIN4P57678 1058 aaKnown RBP5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 PURAQ00577 322 aaKnown RBP5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 AMPD2Q01433 879 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 PIN1Q13526 163 aaPredicted RBP5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 COL9A2Q14055 689 aaPredicted RBP5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 ALDH1L2Q3SY69 923 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 MTERF2Q49AM1 385 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 TBC1D10BQ4KMP7 808 aaPredicted RBP5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 CT47A1Q5JQC4 288 aaPredicted RBP5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 ANO1Q5XXA6 986 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 MCTP2Q6DN12 878 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 CCDC81Q6ZN84 652 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 SPATC1Q76KD6 591 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 STK32CQ86UX6 486 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 MORC1Q86VD1 984 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 NIM1KQ8IY84 436 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 CPXCR1Q8N123 301 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 AFAP1L2Q8N4X5 818 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 MAGEB6Q8N7X4 407 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 LINC00482Q8N8I6 264 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 ANKRD42Q8N9B4 389 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 ATL2Q8NHH9 583 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 HOOK2Q96ED9 719 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms