RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 GNPTABQ3T906 1256 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 FAM47CQ5HY64 1035 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 APOA5Q6Q788 366 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 USP17L6PQ6QN14 398 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 SYNE3Q6ZMZ3 975 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 RETREG2Q8NC44 543 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 CAGE1Q8TC20 777 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 CUL5Q93034 780 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 SPATA33Q96N06 139 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 SENP7Q9BQF6 1050 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 C16orf70Q9BSU1 422 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 LRRC2Q9BYS8 371 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 PRM3Q9NNZ6 103 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 RBM28Q9NW13 759 aaKnown RBP9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 CXXC1Q9P0U4 656 aaPredicted RBP9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 GTF2IRD1Q9UHL9 959 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 SCN5AQ14524 2016 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 PRUNE2Q8WUY3 3088 aa9.15□□□□□ -0.95
UBE2D3-222ENST00000508238 CHD9Q3L8U1 2897 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 FIBPO43427 364 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 EPB41L2O43491 1005 aaKnown RBP9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 PARNO95453 639 aaKnown RBP9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 GGPS1O95749 300 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 CCNYL3P0C7X3 344 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 RXRAP19793 462 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 HOXC8P31273 242 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 CTHP32929 405 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 HSPA4P34932 840 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 SEMA3FQ13275 785 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 KIAA0753Q2KHM9 967 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 ADCK5Q3MIX3 580 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 GDF6Q6KF10 455 aaPredicted RBP9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 METTL7BQ6UX53 244 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 OTOP2Q7RTS6 562 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 MICU3Q86XE3 530 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 CMTR1Q8N1G2 835 aaKnown RBP9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 CCDC155Q8N6L0 562 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 C7orf31Q8N865 590 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 SLC17A8Q8NDX2 589 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 SMARCC2Q8TAQ2 1214 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 AFAP1L1Q8TED9 768 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 PIBF1Q8WXW3 757 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 GPKOWQ92917 476 aaPredicted RBP eCLIP9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 TIFAQ96CG3 184 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 SCLYQ96I15 445 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 FAM161BQ96MY7 647 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 USP26Q9BXU7 913 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 PBX4Q9BYU1 374 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 MLXIPQ9HAP2 919 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 HDAC6Q9UBN7 1215 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 BRPF3Q9ULD4 1205 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 NOD1Q9Y239 953 aa9.14□□□□□ -0.95
UBE2D3-222ENST00000508238 GRXCR1A8MXD5 290 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 hCG_1984214I3L0E3 225 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 MAFGO15525 162 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 ZBTB43O43298 467 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 F12P00748 615 aaPredicted RBP9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 SELPP16109 830 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 PTK7Q13308 1070 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 GPNMBQ14956 572 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 RAB30Q15771 203 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 RTN1Q16799 776 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 NLRX1Q86UT6 975 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 ZNF713Q8N859 430 aaPredicted RBP9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 GIMAP8Q8ND71 665 aaPredicted RBP9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 PHOSPHO2Q8TCD6 241 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 GPRASP2Q96D09 838 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 CDHR1Q96JP9 859 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 ZNF576Q9H609 170 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 BCAS3Q9H6U6 928 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 EVA1BQ9NVM1 165 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 MAP10Q9P2G4 905 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 MSRAQ9UJ68 235 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 SLC4A7Q9Y6M7 1214 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 CHD7Q9P2D1 2997 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 MYO7AQ13402 2215 aa9.13□□□□□ -0.95
UBE2D3-222ENST00000508238 CCDC196A0A1B0GTZ2 297 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 hCG_1642624A0A1W2PR95 340 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 H3BRB1 525 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 REC8O95072 547 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 FOSP01100 380 aaPredicted RBP9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 CXCL10P02778 98 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 ZNF286BP0CG31 522 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 ACTN1P12814 892 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 ITGB5P18084 799 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 ABL2P42684 1182 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 EVCP57679 992 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 GRIN2CQ14957 1233 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 TRIM71Q2Q1W2 868 aaKnown RBP9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 PPP1R18Q6NYC8 613 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 SERINC5Q86VE9 423 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 CCDC82Q8N4S0 544 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 PPP1R13LQ8WUF5 828 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 DHX38Q92620 1227 aaKnown RBP9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 TCEANC2Q96MN5 208 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 GPR20Q99678 358 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 AGXT2Q9BYV1 514 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 GLT8D2Q9H1C3 349 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 TUT1Q9H6E5 874 aaKnown RBP9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 RIC8AQ9NPQ8 531 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms