RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 NFXL1Q6ZNB6 911 aa11.04□□□□□ -0.64
CLCN3-205ENST00000506924 RIOX2Q8IUF8 465 aa11.04□□□□□ -0.64
CLCN3-205ENST00000506924 NUP133Q8WUM0 1156 aa11.04□□□□□ -0.64
CLCN3-205ENST00000506924 TNFRSF25Q93038 417 aa11.04□□□□□ -0.64
CLCN3-205ENST00000506924 JAKMIP1Q96N16 626 aaKnown RBP11.04□□□□□ -0.64
CLCN3-205ENST00000506924 TEX13BQ9BXU2 312 aa11.04□□□□□ -0.64
CLCN3-205ENST00000506924 USP26Q9BXU7 913 aa11.04□□□□□ -0.64
CLCN3-205ENST00000506924 LY9Q9HBG7 655 aa11.04□□□□□ -0.64
CLCN3-205ENST00000506924 CENPFP49454 3210 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 SLC15A5A6NIM6 579 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 SH2B2O14492 632 aaPredicted RBP11.03□□□□□ -0.64
CLCN3-205ENST00000506924 DHX16O60231 1041 aaKnown RBP11.03□□□□□ -0.64
CLCN3-205ENST00000506924 SLC25A27O95847 323 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 PGK2P07205 417 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 PARP1P09874 1014 aaKnown RBP11.03□□□□□ -0.64
CLCN3-205ENST00000506924 ALAS1P13196 640 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 RXRAP19793 462 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 ADORA2AP29274 412 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 SOX18P35713 384 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 RGS2P41220 211 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 PCSK7Q16549 785 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 SLCO4C1Q6ZQN7 724 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 SYT9Q86SS6 491 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 NBPF11Q86T75 865 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 DPP9Q86TI2 863 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 CCDC144CPQ8IYA2 1237 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 SHCBP1Q8NEM2 672 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 NPLOC4Q8TAT6 608 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 ALKBH8Q96BT7 664 aaKnown RBP11.03□□□□□ -0.64
CLCN3-205ENST00000506924 ASB16Q96NS5 453 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 MMP19Q99542 508 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 OXCT2Q9BYC2 517 aaPredicted RBP11.03□□□□□ -0.64
CLCN3-205ENST00000506924 MROH8Q9H579 483 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 FLRT1Q9NZU1 646 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 ZNF536O15090 1300 aa11.03□□□□□ -0.64
CLCN3-205ENST00000506924 CCDC69A6NI79 296 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 ADARB2-AS1A8MUL3 147 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 PLA2G6O60733 806 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 COBLO75128 1261 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 FCER1AP12319 257 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 MAPK1P28482 360 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 GRB14Q14449 540 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 KRT32Q14532 448 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 GRIN2CQ14957 1233 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 GPATCH4Q5T3I0 446 aaKnown RBP11.02□□□□□ -0.65
CLCN3-205ENST00000506924 BTNL9Q6UXG8 535 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 CATIPQ7Z7H3 387 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 ADGRF4Q8IZF3 695 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 SOCS4Q8WXH5 440 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 PIBF1Q8WXW3 757 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 TRIB2Q92519 343 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 USP6NLQ92738 828 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 KCNB2Q92953 911 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 BHMTQ93088 406 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 ARMC5Q96C12 935 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 ZNF333Q96JL9 665 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 RANBP17Q9H2T7 1088 aaKnown RBP11.02□□□□□ -0.65
CLCN3-205ENST00000506924 MAD2L2Q9UI95 211 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 CCPG1Q9ULG6 757 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 SMCHD1A6NHR9 2005 aa11.02□□□□□ -0.65
CLCN3-205ENST00000506924 KLRF2D3W0D1 207 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 ATP2A1O14983 1001 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 IGHA2P01877 340 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 RARAP10276 462 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 NFKB1P19838 968 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 CASTP20810 708 aaKnown RBP11.01□□□□□ -0.65
CLCN3-205ENST00000506924 EXOSC10Q01780 885 aaKnown RBP11.01□□□□□ -0.65
CLCN3-205ENST00000506924 TROAPQ12815 778 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 KCTD2Q14681 263 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 GRM4Q14833 912 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 USH1GQ495M9 461 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 C8orf34Q49A92 452 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 ASPRV1Q53RT3 343 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 MUM1L1Q5H9M0 696 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 TMCO4Q5TGY1 634 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 DHX32Q7L7V1 743 aaKnown RBP11.01□□□□□ -0.65
CLCN3-205ENST00000506924 ZNF438Q7Z4V0 828 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 ZNF654Q8IZM8 581 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 TMEM87BQ96K49 555 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 APBA2Q99767 749 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 RNF146Q9NTX7 359 aa11.01□□□□□ -0.65
CLCN3-205ENST00000506924 ABI2Q9NYB9 513 aaPredicted RBP11.01□□□□□ -0.65
CLCN3-205ENST00000506924 NAP1L2Q9ULW6 460 aaPredicted RBP11.01□□□□□ -0.65
CLCN3-205ENST00000506924 ZNFX1Q9P2E3 1918 aaKnown RBP11.01□□□□□ -0.65
CLCN3-205ENST00000506924 STRNO43815 780 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 SASH3O75995 380 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 ICAM1P05362 532 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 CCL5P13501 91 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 TARSP26639 723 aaKnown RBP11□□□□□ -0.65
CLCN3-205ENST00000506924 CYP2C19P33261 490 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 OAZ1P54368 228 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 UBXN2AP68543 259 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 FGD1P98174 961 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 CDC37Q16543 378 aaPredicted RBP11□□□□□ -0.65
CLCN3-205ENST00000506924 SLC35G1Q2M3R5 365 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 BLOC1S2Q6QNY1 142 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 Q6ZUG5 572 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 ANKRD35Q8N283 1001 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 PMEPA1Q969W9 287 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 DDX11Q96FC9 970 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms