RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 NOD1Q9Y239 953 aa22.45■■□□□ 1.18
SNX25-204ENST00000506896 IGKV6D-21A0A0A0MT36 114 aa22.44■■□□□ 1.18
SNX25-204ENST00000506896 H3BQV1 296 aa22.44■■□□□ 1.18
SNX25-204ENST00000506896 SLC37A4O43826 429 aa22.44■■□□□ 1.18
SNX25-204ENST00000506896 SLC26A2P50443 739 aa22.44■■□□□ 1.18
SNX25-204ENST00000506896 CCL23P55773 120 aa22.44■■□□□ 1.18
SNX25-204ENST00000506896 RASIP1Q5U651 963 aa22.44■■□□□ 1.18
SNX25-204ENST00000506896 FAM160B1Q5W0V3 765 aa22.44■■□□□ 1.18
SNX25-204ENST00000506896 GDF6Q6KF10 455 aaPredicted RBP22.44■■□□□ 1.18
SNX25-204ENST00000506896 ABHD15Q6UXT9 468 aa22.44■■□□□ 1.18
SNX25-204ENST00000506896 UIMC1Q96RL1 719 aa22.44■■□□□ 1.18
SNX25-204ENST00000506896 KCNMB3Q9NPA1 279 aa22.44■■□□□ 1.18
SNX25-204ENST00000506896 WDR64B1ANS9 1081 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 PSMD10O75832 226 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 ACRP10323 421 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 GNAT1P11488 350 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 PDCP20941 246 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 SFNP31947 248 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 TRAPPC10P48553 1259 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 STAT5BP51692 787 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 PTGISQ16647 500 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 LARP1BQ659C4 914 aaKnown RBP22.43■■□□□ 1.18
SNX25-204ENST00000506896 FAM109BQ6ICB4 259 aaPredicted RBP22.43■■□□□ 1.18
SNX25-204ENST00000506896 ZNF365Q70YC5 407 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 SLFN12Q8IYM2 578 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 RDM1Q8NG50 284 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 RNPC3Q96LT9 517 aaKnown RBP22.43■■□□□ 1.18
SNX25-204ENST00000506896 PCDHA10Q9Y5I2 948 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 SCN5AQ14524 2016 aa22.43■■□□□ 1.18
SNX25-204ENST00000506896 BACH1O14867 736 aa22.42■■□□□ 1.18
SNX25-204ENST00000506896 MARCH6O60337 910 aa22.42■■□□□ 1.18
SNX25-204ENST00000506896 PSAPP07602 524 aa22.42■■□□□ 1.18
SNX25-204ENST00000506896 SMIM10L2AP0DMW4 78 aa22.42■■□□□ 1.18
SNX25-204ENST00000506896 SMIM10L2BP0DMW5 78 aa22.42■■□□□ 1.18
SNX25-204ENST00000506896 JAK3P52333 1124 aa22.42■■□□□ 1.18
SNX25-204ENST00000506896 SMAD3P84022 425 aaKnown RBP22.42■■□□□ 1.18
SNX25-204ENST00000506896 ORC2Q13416 577 aaPredicted RBP22.42■■□□□ 1.18
SNX25-204ENST00000506896 AFAP1L1Q8TED9 768 aa22.42■■□□□ 1.18
SNX25-204ENST00000506896 PCYT2Q99447 389 aa22.42■■□□□ 1.18
SNX25-204ENST00000506896 NOL7Q9UMY1 257 aaKnown RBP22.42■■□□□ 1.18
SNX25-204ENST00000506896 SAMM50Q9Y512 469 aa22.42■■□□□ 1.18
SNX25-204ENST00000506896 NRCAMQ92823 1304 aa22.41■■□□□ 1.18
SNX25-204ENST00000506896 C17orf102A2RUQ5 167 aa22.41■■□□□ 1.18
SNX25-204ENST00000506896 PITPNM1O00562 1244 aa22.41■■□□□ 1.18
SNX25-204ENST00000506896 NEMFO60524 1076 aa22.41■■□□□ 1.18
SNX25-204ENST00000506896 BAG4O95429 457 aaKnown RBP22.41■■□□□ 1.18
SNX25-204ENST00000506896 HOXC8P31273 242 aa22.41■■□□□ 1.18
SNX25-204ENST00000506896 PSRC1Q6PGN9 363 aaPredicted RBP22.41■■□□□ 1.18
SNX25-204ENST00000506896 Q7L0L9 218 aa22.41■■□□□ 1.18
SNX25-204ENST00000506896 CCDC155Q8N6L0 562 aa22.41■■□□□ 1.18
SNX25-204ENST00000506896 SCLYQ96I15 445 aa22.41■■□□□ 1.18
SNX25-204ENST00000506896 RNPEPQ9H4A4 650 aa22.41■■□□□ 1.18
SNX25-204ENST00000506896 ZNF302Q9NR11 478 aa22.41■■□□□ 1.18
SNX25-204ENST00000506896 DISC1Q9NRI5 854 aa22.41■■□□□ 1.18
SNX25-204ENST00000506896 KIF28PB7ZC32 967 aa22.4■■□□□ 1.18
SNX25-204ENST00000506896 BFSP2Q13515 415 aa22.4■■□□□ 1.18
SNX25-204ENST00000506896 MCTP1Q6DN14 999 aa22.4■■□□□ 1.18
SNX25-204ENST00000506896 POTEDQ86YR6 584 aa22.4■■□□□ 1.18
SNX25-204ENST00000506896 DEFB123Q8N688 67 aa22.4■■□□□ 1.18
SNX25-204ENST00000506896 HERVK_113Q902F9 699 aa22.4■■□□□ 1.18
SNX25-204ENST00000506896 UNC45AQ9H3U1 944 aa22.4■■□□□ 1.18
SNX25-204ENST00000506896 TET1Q8NFU7 2136 aa22.4■■□□□ 1.18
SNX25-204ENST00000506896 FGBP02675 491 aa22.39■■□□□ 1.17
SNX25-204ENST00000506896 MARK3P27448 753 aa22.39■■□□□ 1.17
SNX25-204ENST00000506896 PTK7Q13308 1070 aa22.39■■□□□ 1.17
SNX25-204ENST00000506896 PPP2R5CQ13362 524 aa22.39■■□□□ 1.17
SNX25-204ENST00000506896 HIC1Q14526 733 aa22.39■■□□□ 1.17
SNX25-204ENST00000506896 CALCRLQ16602 461 aa22.39■■□□□ 1.17
SNX25-204ENST00000506896 SWSAP1Q6NVH7 229 aa22.39■■□□□ 1.17
SNX25-204ENST00000506896 B3GNT9Q6UX72 402 aa22.39■■□□□ 1.17
SNX25-204ENST00000506896 CCDC60Q8IWA6 550 aaPredicted RBP22.39■■□□□ 1.17
SNX25-204ENST00000506896 RPUSD2Q8IZ73 545 aaKnown RBP22.39■■□□□ 1.17
SNX25-204ENST00000506896 CAGE1Q8TC20 777 aa22.39■■□□□ 1.17
SNX25-204ENST00000506896 HAS1Q92839 578 aa22.39■■□□□ 1.17
SNX25-204ENST00000506896 GJA10Q969M2 543 aa22.39■■□□□ 1.17
SNX25-204ENST00000506896 MTMR10Q9NXD2 777 aa22.39■■□□□ 1.17
SNX25-204ENST00000506896 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.38■■□□□ 1.17
SNX25-204ENST00000506896 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.38■■□□□ 1.17
SNX25-204ENST00000506896 CHMP2AO43633 222 aa22.38■■□□□ 1.17
SNX25-204ENST00000506896 IQCF3P0C7M6 154 aa22.38■■□□□ 1.17
SNX25-204ENST00000506896 RBL2Q08999 1139 aa22.38■■□□□ 1.17
SNX25-204ENST00000506896 PPFIA1Q13136 1202 aa22.38■■□□□ 1.17
SNX25-204ENST00000506896 TTC38Q5R3I4 469 aa22.38■■□□□ 1.17
SNX25-204ENST00000506896 PDXDC2PQ6P474 469 aa22.38■■□□□ 1.17
SNX25-204ENST00000506896 MIER3Q7Z3K6 550 aa22.38■■□□□ 1.17
SNX25-204ENST00000506896 DHX38Q92620 1227 aaKnown RBP22.38■■□□□ 1.17
SNX25-204ENST00000506896 ATP6V0A1Q93050 837 aa22.38■■□□□ 1.17
SNX25-204ENST00000506896 TRPC6Q9Y210 931 aa22.38■■□□□ 1.17
SNX25-204ENST00000506896 MAFBQ9Y5Q3 323 aaPredicted RBP22.38■■□□□ 1.17
SNX25-204ENST00000506896 TANC1Q9C0D5 1861 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 COL6A3P12111 3177 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 KAT6AQ92794 2004 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 POTEB3A0JP26 581 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 RRN3P2A6NIE6 340 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 ATP2B1P20020 1258 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 MCM7P33993 719 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 PLCB4Q15147 1175 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 POTEBQ6S5H4 581 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 SERINC5Q86VE9 423 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 RETREG2Q8NC44 543 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms