RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 USP53Q70EK8 1073 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 NUDT10Q8NFP7 164 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 TTLL11Q8NHH1 800 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 PIP4K2CQ8TBX8 421 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 NUDT11Q96G61 164 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 EPN3Q9H201 632 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 ADARB2Q9NS39 739 aaKnown RBP4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 PRKAG3Q9UGI9 489 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 R3HCC1Q9Y3T6 440 aaKnown RBP4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 NUB1Q9Y5A7 615 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 CTGFP29279 349 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 ADRA1BP35368 520 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 GLRBP48167 497 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 PPP2R2AP63151 447 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 MAP4K2Q12851 820 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 SMAD2Q15796 467 aaKnown RBP4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 SLC10A6Q3KNW5 377 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 SLC35F1Q5T1Q4 408 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 GPR155Q7Z3F1 870 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 DTX3Q8N9I9 347 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 CACTINQ8WUQ7 758 aaKnown RBP4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 C1orf159Q96HA4 380 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 IER2Q9BTL4 223 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 PHF20Q9BVI0 1012 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 JAM3Q9BX67 310 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 KRTAP1-5Q9BYS1 174 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 ZNF408Q9H9D4 720 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 SLC6A20Q9NP91 592 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 GPR27Q9NS67 375 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 PTGFRNQ9P2B2 879 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 PPARGC1AQ9UBK2 798 aaKnown RBP4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 ZFP69BQ9UJL9 534 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 ADAM29Q9UKF5 820 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 WASF3Q9UPY6 502 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 NPFFR2Q9Y5X5 522 aa4.16□□□□□ -1.74
TOPBP1-205ENST00000506779 GJB6O95452 261 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 GNAT1P11488 350 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 COL6A1P12109 1028 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 KRT4P19013 534 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 MAKP20794 623 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 GRK2P25098 689 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 GRK3P35626 688 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 GRIA2P42262 883 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 SKIDA1Q1XH10 827 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 TCTN3Q6NUS6 607 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 Q6ZUG5 572 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 GIMAP8Q8ND71 665 aaPredicted RBP4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 SREK1Q8WXA9 508 aaKnown RBP4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 EDAQ92838 391 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 PLEKHG4BQ96PX9 1271 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 LRRC37BQ96QE4 947 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 LMF1Q96S06 567 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 PRRX2Q99811 253 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 HSPBP1Q9NZL4 362 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 ARHGAP20Q9P2F6 1191 aa4.15□□□□□ -1.75
TOPBP1-205ENST00000506779 MSCO60682 206 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 KLHL18O94889 574 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 CNOT4O95628 575 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 CHGBP05060 677 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 FAHP16930 419 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 ETFBP38117 255 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 SPIRE1Q08AE8 756 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 TUSC3Q13454 348 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 SF3A1Q15459 793 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 KIZQ2M2Z5 673 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 PAN2Q504Q3 1202 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 COLEC12Q5KU26 742 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 PROSER1Q86XN7 944 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 C1orf210Q8IVY1 113 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 RBM12BQ8IXT5 1001 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 MICAL1Q8TDZ2 1067 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 ARMC5Q96C12 935 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 GNRHR2Q96P88 292 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 TTPALQ9BTX7 342 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 TANGO6Q9C0B7 1094 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 SEC61A2Q9H9S3 476 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 SLC4A7Q9Y6M7 1214 aa4.14□□□□□ -1.75
TOPBP1-205ENST00000506779 A0A1W2PQU0 124 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 H0Y858 1186 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 KLF4O43474 513 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 KNG1P01042 644 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 LTFP02788 710 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 CKMP06732 381 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 ENO2P09104 434 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 COL6A2P12110 1019 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 TUBA3CQ13748 450 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 HSP90AA2PQ14568 343 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 TUBA3EQ6PEY2 450 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 OTOP3Q7RTS5 596 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 REXO1L1PQ8IX06 675 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 STPG3Q8N7X2 389 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 UHMK1Q8TAS1 419 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 ZNF483Q8TF39 744 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 CLEC4DQ8WXI8 215 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 KCNJ15Q99712 375 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 CDIP1Q9H305 208 aa4.13□□□□□ -1.75
TOPBP1-205ENST00000506779 DLX3O60479 287 aa4.12□□□□□ -1.75
TOPBP1-205ENST00000506779 CSF2RBP32927 897 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms