RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 PSMD2Q13200 908 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 PGM5Q15124 567 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 PARD6BQ9BYG5 372 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 MEIS1O00470 390 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 BIN1O00499 593 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 MSH4O15457 936 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 OR52Z1P0C646 297 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 PTPREP23469 700 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 SREBF1P36956 1147 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 PEX19P40855 299 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 AFMP43652 599 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 VEGFBP49765 207 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 APLP1P51693 650 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 PABPC4Q13310 644 aaKnown RBP eCLIP12.69□□□□□ -0.38
ITGA3-208ENST00000506437 LONRF2Q1L5Z9 754 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 LONRF3Q496Y0 759 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 ADALQ6DHV7 355 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 DTHD1Q6ZMT9 781 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 CNNM3Q8NE01 707 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 LRRC15Q8TF66 581 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 PPP1R13LQ8WUF5 828 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 LENG9Q96B70 501 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 NUP62CLQ9H1M0 184 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 DOCK5Q9H7D0 1870 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 PXMP2Q9NR77 195 aa12.69□□□□□ -0.38
ITGA3-208ENST00000506437 LOC285556D6RIA3 1793 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 ELP1O95163 1332 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 SOWAHBA6NEL2 793 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 ZBTB39O15060 712 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 CALRP27797 417 aaKnown RBP12.68□□□□□ -0.38
ITGA3-208ENST00000506437 CTGFP29279 349 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 RIOX2Q8IUF8 465 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 MRPS27Q92552 414 aaKnown RBP12.68□□□□□ -0.38
ITGA3-208ENST00000506437 MMP19Q99542 508 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 PDCD2LQ9BRP1 358 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 RABGAP1Q9Y3P9 1069 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 MYCP01106 439 aaPredicted RBP12.68□□□□□ -0.38
ITGA3-208ENST00000506437 NR3C2P08235 984 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 NCAPH2Q6IBW4 605 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 TATDN2Q93075 761 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 BMP2KQ9NSY1 1161 aaPredicted RBP12.68□□□□□ -0.38
ITGA3-208ENST00000506437 ZNFX1Q9P2E3 1918 aaKnown RBP12.68□□□□□ -0.38
ITGA3-208ENST00000506437 MYO1FO00160 1098 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 PIK3CDO00329 1044 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 COBLO75128 1261 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 ADORA2AP29274 412 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 CCDC73Q6ZRK6 1079 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 ANKRD23Q86SG2 305 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 MCF2L2Q86YR7 1114 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 PARD3BQ8TEW8 1205 aa12.68□□□□□ -0.38
ITGA3-208ENST00000506437 SRPRBQ9Y5M8 271 aaKnown RBP12.68□□□□□ -0.38
ITGA3-208ENST00000506437 ZSWIM8A7E2V4 1837 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 RGS20O76081 388 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 ZNF202O95125 648 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 KCTD2Q14681 263 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 ECM1Q16610 540 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 FBXO16Q8IX29 292 aaPredicted RBP12.67□□□□□ -0.38
ITGA3-208ENST00000506437 CRYGNQ8WXF5 182 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 PARK7Q99497 189 aaKnown RBP12.67□□□□□ -0.38
ITGA3-208ENST00000506437 TNMDQ9H2S6 317 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 PRDM16Q9HAZ2 1276 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 PDGFCQ9NRA1 345 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 KCNH7Q9NS40 1196 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 RGL1Q9NZL6 768 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 SERTAD1Q9UHV2 236 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 KCNH3Q9ULD8 1083 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 PCDHA12Q9UN75 941 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 IGLV3-22A0A075B6J6 115 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 MANSC4A6NHS7 340 aaPredicted RBP12.67□□□□□ -0.38
ITGA3-208ENST00000506437 MYBL2P10244 700 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 SYKP43405 635 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 AP3B2Q13367 1082 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 CEP55Q53EZ4 464 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 ZNF483Q8TF39 744 aaPredicted RBP12.67□□□□□ -0.38
ITGA3-208ENST00000506437 SDF4Q9BRK5 362 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 TRIM6Q9C030 488 aaPredicted RBP12.67□□□□□ -0.38
ITGA3-208ENST00000506437 BLZF1Q9H2G9 400 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 CEP131Q9UPN4 1083 aa12.67□□□□□ -0.38
ITGA3-208ENST00000506437 TMEM150BA6NC51 233 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 EML1O00423 815 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 CYP2B6P20813 491 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 CCL14Q16627 93 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 DNAJC14Q6Y2X3 702 aaPredicted RBP12.66□□□□□ -0.38
ITGA3-208ENST00000506437 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.66□□□□□ -0.38
ITGA3-208ENST00000506437 CCDC102AQ96A19 550 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 ETAA1Q9NY74 926 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 G3BP2Q9UN86 482 aaKnown RBP12.66□□□□□ -0.38
ITGA3-208ENST00000506437 PPP6R2O75170 966 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 FCER1AP12319 257 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 TRAPPC10P48553 1259 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 SP2Q02086 613 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 ACTN3Q08043 901 aaPredicted RBP12.66□□□□□ -0.38
ITGA3-208ENST00000506437 PNOCQ13519 176 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 AP1ARQ63HQ0 302 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 GPR142Q7Z601 462 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 COPS5Q92905 334 aa12.66□□□□□ -0.38
ITGA3-208ENST00000506437 LENG1Q96BZ8 264 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms