RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 FIGNQ5HY92 759 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 TMEM240Q5SV17 173 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 CC2D1AQ6P1N0 951 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 CEP128Q6ZU80 1094 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 FRMD7Q6ZUT3 714 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 SLCO6A1Q86UG4 719 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 NOSTRINQ8IVI9 506 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 MORC4Q8TE76 937 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 LINC01599Q8WXQ3 324 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 ASIC4Q96FT7 647 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 G6PC3Q9BUM1 346 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 ZDHHC5Q9C0B5 715 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 CARS2Q9HA77 564 aaKnown RBP4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 SP110Q9HB58 689 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 ARNT2Q9HBZ2 717 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 TOPORSQ9NS56 1045 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 KCNG1Q9UIX4 513 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 SRPK3Q9UPE1 567 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 B3GALT1Q9Y5Z6 326 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 ATP23Q9Y6H3 246 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 CEP164Q9UPV0 1460 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 A0A1W2PQJ5 194 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 PRR19A6NJB7 356 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 TRIM75PA6NK02 468 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 FZD9O00144 591 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 PRPF3O43395 683 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 PF4V1P10720 104 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 CYP2C19P33261 490 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 RHBDL3P58872 404 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 BIRC2Q13490 618 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 GTF2H3Q13889 308 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 UBE4AQ14139 1066 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 MINDY4Q4G0A6 757 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 HSF5Q4G112 596 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 GORABQ5T7V8 394 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 EFCAB2Q5VUJ9 269 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 CYP4F22Q6NT55 531 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 PPP4R4Q6NUP7 873 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 GALNT18Q6P9A2 607 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 SLC4A10Q6U841 1118 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 DGKHQ86XP1 1220 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 SPPL2CQ8IUH8 684 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 TPH2Q8IWU9 490 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 STK11IPQ8N1F8 1099 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 ANKS4BQ8N8V4 417 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 UHMK1Q8TAS1 419 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 SH3RF2Q8TEC5 729 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 LMBR1Q8WVP7 490 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 DLG3Q92796 817 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 PMM1Q92871 262 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 ACAP3Q96P50 834 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 ADAMTS10Q9H324 1103 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 SMOC1Q9H4F8 434 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 PDLIM7Q9NR12 457 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 KCNH7Q9NS40 1196 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 TAF6LQ9Y6J9 622 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 FANCD2Q9BXW9 1451 aa4.18□□□□□ -1.74
TRAPPC11-205ENST00000506426 LOC102724159A0A0B4J2E5 919 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 HGSO14964 777 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 XPOTO43592 962 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 KDM1AO60341 852 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 USP2O75604 605 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 LTFP02788 710 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 NTRK1P04629 796 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 ZGLP1P0C6A0 271 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 SPINK2P20155 84 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 PTX3P26022 381 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 GJA4P35212 333 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 GPR3P46089 330 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 JAG1P78504 1218 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 CHRNEQ04844 493 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 ZP2Q05996 745 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 ADCY1Q08828 1119 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 BNIP3Q12983 259 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 OS9Q13438 667 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 TMEM132BQ14DG7 1078 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 PWP2Q15269 919 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 CLUL1Q15846 466 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 EMC4Q5J8M3 183 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 STEAP3Q658P3 488 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 CPZQ66K79 652 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 KSR2Q6VAB6 950 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 TTLL7Q6ZT98 887 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 KCTD1Q719H9 257 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 CABP7Q86V35 215 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 NME9Q86XW9 330 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 CMIPQ8IY22 773 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 HSPBAP1Q96EW2 488 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 CCDC120Q96HB5 630 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 ALPK1Q96QP1 1244 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 NUP88Q99567 741 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 CD244Q9BZW8 370 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 ZMAT4Q9H898 229 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 PRDM11Q9NQV5 511 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 OBP2AQ9NY56 170 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 SLAMF8Q9P0V8 285 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 USP36Q9P275 1121 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 IMPACTQ9P2X3 320 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 EBF1Q9UH73 591 aa4.17□□□□□ -1.74
TRAPPC11-205ENST00000506426 RCAN3Q9UKA8 241 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms