RNA–Protein interactions for RNA: ENST00000506360.5

SH3TC1-210, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 5,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-210ENST00000506360 IFT88Q13099 833 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 GRAPQ13588 217 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 C10orf76Q5T2E6 689 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 GRAPLQ8TC17 118 aaPredicted RBP17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 TSPYL2Q9H2G4 693 aaPredicted RBP17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 SRP68Q9UHB9 627 aaKnown RBP17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 ERVV-1B6SEH8 477 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 PPFIA2O75334 1257 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 HP1BP3Q5SSJ5 553 aaPredicted RBP17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 FAM8A1Q9UBU6 413 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 ABCA5Q8WWZ7 1642 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 ZNF772Q68DY9 489 aaPredicted RBP17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 PSPC1Q8WXF1 523 aaKnown RBP17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 ZNF341Q9BYN7 854 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 BNIP3LO60238 219 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 ZNF18P17022 549 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 SOX5P35711 763 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 DALRD3Q5D0E6 543 aaKnown RBP17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 CIAPIN1Q6FI81 312 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 ORC6Q9Y5N6 252 aa17.49■□□□□ 0.39
SH3TC1-210ENST00000506360 CDO1Q16878 200 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 HSPH1Q92598 858 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 CDR2Q01850 454 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 GCNAQ96QF7 691 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 ZWILCHQ9H900 591 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 OLA1Q9NTK5 396 aaKnown RBP17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 ABT1Q9ULW3 272 aaKnown RBP17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 ZBED6P86452 979 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 ALCAMQ13740 583 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 RASGRF1Q13972 1273 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 ARL13BQ3SXY8 428 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 PHLPP2Q6ZVD8 1323 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 NPR1P16066 1061 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 HSPA6P17066 643 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 SLC8A2Q9UPR5 921 aa17.48■□□□□ 0.39
SH3TC1-210ENST00000506360 MYL3P08590 195 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 ELF1P32519 619 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 PTPN12Q05209 780 aaKnown RBP17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 RSBN1LQ6PCB5 846 aaPredicted RBP17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 RNF207Q6ZRF8 634 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 FAM49AQ9H0Q0 323 aaPredicted RBP17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 HMGB1P1B2RPK0 211 aaPredicted RBP17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 K7ERI5 159 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 TTI1O43156 1089 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 HEG1Q9ULI3 1381 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 ZBED1O96006 694 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 OR6B3Q8NGW1 331 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 CDC26Q8NHZ8 85 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 ENOX1Q8TC92 643 aaKnown RBP17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 EXOC1LA0A1B0GW35 172 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 GCKP35557 465 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 BBS9Q3SYG4 887 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 CXorf38Q8TB03 319 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 AP1M1Q9BXS5 423 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 NDST4Q9H3R1 872 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 METP08581 1390 aa17.47■□□□□ 0.39
SH3TC1-210ENST00000506360 LUC7L3O95232 432 aaKnown RBP17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 PEX3P56589 373 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 DR1Q01658 176 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 SLMAPQ14BN4 828 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 WHAMMQ8TF30 809 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 SLC10A4Q96EP9 437 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 TPX2Q9ULW0 747 aaKnown RBP17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 SFI1A8K8P3 1242 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 PLS3P13797 630 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 PMLP29590 882 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 RCOR1Q9UKL0 485 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 G3BP2Q9UN86 482 aaKnown RBP17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 SLFN12LQ6IEE8 588 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 RWDD4Q6NW29 188 aaKnown RBP17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 ERICH1Q86X53 443 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 AIFM3Q96NN9 605 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 COA1Q9GZY4 146 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 BHMT2Q9H2M3 363 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 BSDC1Q9NW68 430 aaPredicted RBP17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 FAF1Q9UNN5 650 aaPredicted RBP17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 PLEKHA8P1O95397 391 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 SH3BGRP55822 239 aaPredicted RBP17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 SUSD4Q5VX71 490 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 RNF14Q9UBS8 474 aa17.46■□□□□ 0.39
SH3TC1-210ENST00000506360 WDR91A4D1P6 747 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 CTNND1O60716 968 aaKnown RBP17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 PSMA2P25787 234 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 RASIP1Q5U651 963 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 FOXP4Q8IVH2 680 aaPredicted RBP17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 RTKN2Q8IZC4 609 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 RNF217Q8TC41 542 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 GINM1Q9NU53 330 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 NLRP1Q9C000 1473 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 LRRC63Q05C16 580 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 GAS2L3Q86XJ1 694 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 VSTM4Q8IW00 320 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 PDCD7Q8N8D1 485 aaKnown RBP17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 ALKBH8Q96BT7 664 aaKnown RBP17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 NDUFA10O95299 355 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 PLEKHG1Q9ULL1 1385 aa17.45■□□□□ 0.38
SH3TC1-210ENST00000506360 TRIM67Q6ZTA4 783 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms