RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 SUGT1Q9Y2Z0 365 aa7.73□□□□□ -1.17
SMAD5-201ENST00000506223 ZBED9Q6R2W3 1325 aa7.73□□□□□ -1.17
SMAD5-201ENST00000506223 PIEZO1Q92508 2521 aa7.73□□□□□ -1.17
SMAD5-201ENST00000506223 MYO9BQ13459 2157 aa7.72□□□□□ -1.17
SMAD5-201ENST00000506223 COL6A1P12109 1028 aa7.72□□□□□ -1.17
SMAD5-201ENST00000506223 LIG1P18858 919 aa7.72□□□□□ -1.17
SMAD5-201ENST00000506223 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
SMAD5-201ENST00000506223 RFX5P48382 616 aaPredicted RBP7.72□□□□□ -1.17
SMAD5-201ENST00000506223 SOX9P48436 509 aa7.72□□□□□ -1.17
SMAD5-201ENST00000506223 REC114Q7Z4M0 266 aa7.72□□□□□ -1.17
SMAD5-201ENST00000506223 TMEM57Q8N5G2 664 aa7.72□□□□□ -1.17
SMAD5-201ENST00000506223 ZSCAN1Q8NBB4 408 aa7.72□□□□□ -1.17
SMAD5-201ENST00000506223 WDR89Q96FK6 387 aaPredicted RBP7.72□□□□□ -1.17
SMAD5-201ENST00000506223 PHIPQ8WWQ0 1821 aa7.72□□□□□ -1.17
SMAD5-201ENST00000506223 MYH13Q9UKX3 1938 aa7.72□□□□□ -1.17
SMAD5-201ENST00000506223 A0A1B0GUL7 405 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 WISP1O95388 367 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 HMGCRP04035 888 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 SELPP16109 830 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 FGFR2P21802 821 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 GTF2F1P35269 517 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMAD5-201ENST00000506223 CDK8P49336 464 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 TFCP2Q12800 502 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 SHHQ15465 462 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 WIPI1Q5MNZ9 446 aaPredicted RBP7.71□□□□□ -1.18
SMAD5-201ENST00000506223 C9orf50Q5SZB4 431 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 DCAF15Q66K64 600 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 SPTY2D1Q68D10 685 aaPredicted RBP7.71□□□□□ -1.18
SMAD5-201ENST00000506223 MIGA2Q7L4E1 593 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 ATG9AQ7Z3C6 839 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 DHX38Q92620 1227 aaKnown RBP7.71□□□□□ -1.18
SMAD5-201ENST00000506223 ZDHHC15Q96MV8 337 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 NOL10Q9BSC4 688 aaKnown RBP7.71□□□□□ -1.18
SMAD5-201ENST00000506223 WDR18Q9BV38 432 aa7.71□□□□□ -1.18
SMAD5-201ENST00000506223 NOP53Q9NZM5 478 aaKnown RBP7.71□□□□□ -1.18
SMAD5-201ENST00000506223 MUC6Q6W4X9 2439 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 SURF6O75683 361 aaKnown RBP7.7□□□□□ -1.18
SMAD5-201ENST00000506223 MCM4P33991 863 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 PHKA1P46020 1223 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 TIMM10P62072 90 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 PRRT3Q5FWE3 981 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 CCDC158Q5M9N0 1113 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 TTC39AQ5SRH9 613 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 LRFN4Q6PJG9 635 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 HHIPL2Q6UWX4 724 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 PLPPR2Q96GM1 343 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 UHRF1Q96T88 793 aaPredicted RBP7.7□□□□□ -1.18
SMAD5-201ENST00000506223 LBHD1Q9BQE6 289 aaPredicted RBP7.7□□□□□ -1.18
SMAD5-201ENST00000506223 RUSC1Q9BVN2 902 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 CHMP4BQ9H444 224 aaKnown RBP7.7□□□□□ -1.18
SMAD5-201ENST00000506223 BRMS1Q9HCU9 246 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 STRIP2Q9ULQ0 834 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 XIRP2A4UGR9 3374 aa7.7□□□□□ -1.18
SMAD5-201ENST00000506223 CHD9Q3L8U1 2897 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 SSBP05455 408 aaKnown RBP eCLIP7.69□□□□□ -1.18
SMAD5-201ENST00000506223 PRDX5P30044 214 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 ADORA1P30542 326 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 ZNF165P49910 485 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 GSTO1P78417 241 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 SMAD3P84022 425 aaKnown RBP7.69□□□□□ -1.18
SMAD5-201ENST00000506223 TCP10Q12799 353 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 MTX1Q13505 466 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 INPP5AQ14642 412 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 EXOSC6Q5RKV6 272 aaKnown RBP7.69□□□□□ -1.18
SMAD5-201ENST00000506223 IGF2-ASQ6U949 168 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 KIAA1211Q6ZU35 1233 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 ACAD11Q709F0 780 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 HDXQ7Z353 690 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 ALYREFQ86V81 257 aaKnown RBP7.69□□□□□ -1.18
SMAD5-201ENST00000506223 REXO1Q8N1G1 1221 aaKnown RBP7.69□□□□□ -1.18
SMAD5-201ENST00000506223 ANKRD13CQ8N6S4 541 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 BEND7Q8N7W2 519 aaPredicted RBP7.69□□□□□ -1.18
SMAD5-201ENST00000506223 ELMO3Q96BJ8 720 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 COA7Q96BR5 231 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 ASB2Q96Q27 587 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 ZNF341Q9BYN7 854 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 MRPL18Q9H0U6 180 aaKnown RBP7.69□□□□□ -1.18
SMAD5-201ENST00000506223 RAD18Q9NS91 495 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 USP40Q9NVE5 1235 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 RAI14Q9P0K7 980 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 LRP2BPQ9P2M1 347 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 PPT2Q9UMR5 302 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 TNNQ9UQP3 1299 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 RLFQ13129 1914 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 CNTNAP5Q8WYK1 1306 aa7.69□□□□□ -1.18
SMAD5-201ENST00000506223 A0A0G2JLL6 359 aaPredicted RBP7.68□□□□□ -1.18
SMAD5-201ENST00000506223 PNMA6EA0A0J9YXQ4 647 aa7.68□□□□□ -1.18
SMAD5-201ENST00000506223 GFRA2O00451 464 aa7.68□□□□□ -1.18
SMAD5-201ENST00000506223 LDHCP07864 332 aa7.68□□□□□ -1.18
SMAD5-201ENST00000506223 SLFN14P0C7P3 912 aa7.68□□□□□ -1.18
SMAD5-201ENST00000506223 UQCRFS1P1P0C7P4 283 aa7.68□□□□□ -1.18
SMAD5-201ENST00000506223 PICALMQ13492 652 aa7.68□□□□□ -1.18
SMAD5-201ENST00000506223 RASGRF1Q13972 1273 aa7.68□□□□□ -1.18
SMAD5-201ENST00000506223 GADL1Q6ZQY3 521 aa7.68□□□□□ -1.18
SMAD5-201ENST00000506223 GK5Q6ZS86 529 aa7.68□□□□□ -1.18
SMAD5-201ENST00000506223 PRRT2Q7Z6L0 340 aaPredicted RBP7.68□□□□□ -1.18
SMAD5-201ENST00000506223 FAM83AQ86UY5 434 aa7.68□□□□□ -1.18
SMAD5-201ENST00000506223 PPM1EQ8WY54 764 aa7.68□□□□□ -1.18
SMAD5-201ENST00000506223 TRIB2Q92519 343 aa7.68□□□□□ -1.18
SMAD5-201ENST00000506223 LRFN3Q9BTN0 628 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms