RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 CTNNA3Q9UI47 895 aa11.94□□□□□ -0.5
BRIX1-202ENST00000506023 MRPL42Q9Y6G3 142 aaKnown RBP11.94□□□□□ -0.5
BRIX1-202ENST00000506023 MBLAC1A4D2B0 266 aaPredicted RBP11.93□□□□□ -0.5
BRIX1-202ENST00000506023 E7EWF7 191 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 NOP56O00567 594 aaKnown RBP11.93□□□□□ -0.5
BRIX1-202ENST00000506023 DGKIO75912 1065 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 PLEKHA8P1O95397 391 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 GLP2RO95838 553 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 MMP1P03956 469 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 ITGB5P18084 799 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 TCF7P36402 384 aaPredicted RBP11.93□□□□□ -0.5
BRIX1-202ENST00000506023 NEDD9Q14511 834 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 PUS10Q3MIT2 529 aaKnown RBP11.93□□□□□ -0.5
BRIX1-202ENST00000506023 PCNX4Q63HM2 1172 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 MB21D2Q8IYB1 491 aaPredicted RBP11.93□□□□□ -0.5
BRIX1-202ENST00000506023 PRSS33Q8NF86 280 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 APBB2Q92870 758 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 PKD2L1Q9P0L9 805 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 HCSTQ9UBK5 93 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 PRKAG3Q9UGI9 489 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 CDY2AQ9Y6F7 541 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 MYO10Q9HD67 2058 aa11.93□□□□□ -0.5
BRIX1-202ENST00000506023 MYH9P35579 1960 aaKnown RBP11.92□□□□□ -0.5
BRIX1-202ENST00000506023 hCG_1642624A0A1W2PR95 340 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 IFIT3O14879 490 aaKnown RBP11.92□□□□□ -0.5
BRIX1-202ENST00000506023 ITGB1P05556 798 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 CD52P31358 61 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 ADAM15Q13444 863 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 GRIK4Q16099 956 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 UBE2SQ16763 222 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 GNPTABQ3T906 1256 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 IER5LQ5T953 404 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 RNF135Q8IUD6 432 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 TRAPPC12Q8WVT3 735 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 TMX1Q9H3N1 280 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 IGFLR1Q9H665 355 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 LY9Q9HBG7 655 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 PLAGL2Q9UPG8 496 aa11.92□□□□□ -0.5
BRIX1-202ENST00000506023 NRCAMQ92823 1304 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 CACNA1HO95180 2353 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 PIK3CDO00329 1044 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 RB1P06400 928 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 RXRAP19793 462 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 TMEM62Q0P6H9 643 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 PPFIA1Q13136 1202 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 HERC4Q5GLZ8 1057 aaPredicted RBP11.91□□□□□ -0.5
BRIX1-202ENST00000506023 TTC22Q5TAA0 569 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 RAB11FIP4Q86YS3 637 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 SRBD1Q8N5C6 995 aaKnown RBP11.91□□□□□ -0.5
BRIX1-202ENST00000506023 VN1R2Q8NFZ6 395 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 SPPL3Q8TCT6 385 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 SENP7Q9BQF6 1050 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 TUBE1Q9UJT0 475 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 UBIAD1Q9Y5Z9 338 aa11.91□□□□□ -0.5
BRIX1-202ENST00000506023 VPS13AQ96RL7 3174 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 HIP1O00291 1037 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 MGEA5O60502 916 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 STAM2O75886 525 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 CHMLP26374 656 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 IGBP1P78318 339 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 SMAD4Q13485 552 aaKnown RBP11.9□□□□□ -0.5
BRIX1-202ENST00000506023 BTG3Q14201 252 aaPredicted RBP11.9□□□□□ -0.5
BRIX1-202ENST00000506023 WTAPQ15007 396 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 PAN2Q504Q3 1202 aaKnown RBP11.9□□□□□ -0.5
BRIX1-202ENST00000506023 TYW1BQ6NUM6 668 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 ZNF654Q8IZM8 581 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 KLHL23Q8NBE8 558 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 CYP2W1Q8TAV3 490 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 C11orf84Q9BUA3 381 aaPredicted RBP11.9□□□□□ -0.5
BRIX1-202ENST00000506023 SPZ1Q9BXG8 430 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 FAM49AQ9H0Q0 323 aaPredicted RBP11.9□□□□□ -0.5
BRIX1-202ENST00000506023 LMAN2LQ9H0V9 348 aa11.9□□□□□ -0.5
BRIX1-202ENST00000506023 RWDD1Q9H446 243 aaPredicted RBP11.9□□□□□ -0.5
BRIX1-202ENST00000506023 ZNF215Q9UL58 517 aaPredicted RBP11.9□□□□□ -0.5
BRIX1-202ENST00000506023 BARX2Q9UMQ3 279 aaPredicted RBP11.9□□□□□ -0.5
BRIX1-202ENST00000506023 EYA4O95677 639 aa11.89□□□□□ -0.51
BRIX1-202ENST00000506023 GNAT1P11488 350 aa11.89□□□□□ -0.51
BRIX1-202ENST00000506023 INSRRP14616 1297 aa11.89□□□□□ -0.51
BRIX1-202ENST00000506023 MRPS6P82932 125 aaKnown RBP11.89□□□□□ -0.51
BRIX1-202ENST00000506023 CSPP1Q1MSJ5 1256 aa11.89□□□□□ -0.51
BRIX1-202ENST00000506023 TMEM266Q2M3C6 531 aa11.89□□□□□ -0.51
BRIX1-202ENST00000506023 TAF2Q6P1X5 1199 aa11.89□□□□□ -0.51
BRIX1-202ENST00000506023 TSHZ1Q6ZSZ6 1077 aa11.89□□□□□ -0.51
BRIX1-202ENST00000506023 SMARCC2Q8TAQ2 1214 aa11.89□□□□□ -0.51
BRIX1-202ENST00000506023 GPRASP2Q96D09 838 aa11.89□□□□□ -0.51
BRIX1-202ENST00000506023 PGBD1Q96JS3 809 aa11.89□□□□□ -0.51
BRIX1-202ENST00000506023 CDHR5Q9HBB8 845 aa11.89□□□□□ -0.51
BRIX1-202ENST00000506023 CD207Q9UJ71 328 aa11.89□□□□□ -0.51
BRIX1-202ENST00000506023 LOC730098B7Z3J9 87 aa11.88□□□□□ -0.51
BRIX1-202ENST00000506023 STXBP3O00186 592 aa11.88□□□□□ -0.51
BRIX1-202ENST00000506023 ADAMTS3O15072 1205 aa11.88□□□□□ -0.51
BRIX1-202ENST00000506023 TCF15Q12870 199 aa11.88□□□□□ -0.51
BRIX1-202ENST00000506023 ITGB3BPQ13352 177 aaPredicted RBP11.88□□□□□ -0.51
BRIX1-202ENST00000506023 PLCB4Q15147 1175 aa11.88□□□□□ -0.51
BRIX1-202ENST00000506023 RBM23Q86U06 439 aaKnown RBP11.88□□□□□ -0.51
BRIX1-202ENST00000506023 SMRP1Q8NCR6 262 aa11.88□□□□□ -0.51
BRIX1-202ENST00000506023 NCOA7Q8NI08 942 aa11.88□□□□□ -0.51
BRIX1-202ENST00000506023 POF1BQ8WVV4 589 aa11.88□□□□□ -0.51
BRIX1-202ENST00000506023 TMEM40Q8WWA1 233 aa11.88□□□□□ -0.51
BRIX1-202ENST00000506023 SEPT1Q8WYJ6 367 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms