RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 SDF4Q9BRK5 362 aa28.21■■■□□ 2.11
HERC4-212ENST00000505760 AZI2Q9H6S1 392 aa28.21■■■□□ 2.11
HERC4-212ENST00000505760 STXBP3O00186 592 aa28.2■■■□□ 2.1
HERC4-212ENST00000505760 HMGB1P09429 215 aaKnown RBP28.2■■■□□ 2.1
HERC4-212ENST00000505760 CYP2W1Q8TAV3 490 aa28.2■■■□□ 2.1
HERC4-212ENST00000505760 SAMD11Q96NU1 681 aa28.2■■■□□ 2.1
HERC4-212ENST00000505760 ANO3Q9BYT9 981 aa28.2■■■□□ 2.1
HERC4-212ENST00000505760 NLRC5Q86WI3 1866 aa28.2■■■□□ 2.1
HERC4-212ENST00000505760 MBLAC1A4D2B0 266 aaPredicted RBP28.19■■■□□ 2.1
HERC4-212ENST00000505760 SMCO2A6NFE2 343 aa28.19■■■□□ 2.1
HERC4-212ENST00000505760 EPC2Q52LR7 807 aa28.19■■■□□ 2.1
HERC4-212ENST00000505760 CEP55Q53EZ4 464 aa28.19■■■□□ 2.1
HERC4-212ENST00000505760 DNAJB3Q8WWF6 145 aa28.19■■■□□ 2.1
HERC4-212ENST00000505760 TNPO1Q92973 898 aaKnown RBP28.19■■■□□ 2.1
HERC4-212ENST00000505760 GLT8D2Q9H1C3 349 aa28.19■■■□□ 2.1
HERC4-212ENST00000505760 BARHL2Q9NY43 387 aa28.19■■■□□ 2.1
HERC4-212ENST00000505760 RRN3P2A6NIE6 340 aa28.18■■■□□ 2.1
HERC4-212ENST00000505760 MARCH8Q5T0T0 291 aa28.18■■■□□ 2.1
HERC4-212ENST00000505760 TRPC6Q9Y210 931 aa28.18■■■□□ 2.1
HERC4-212ENST00000505760 NFASCO94856 1347 aa28.18■■■□□ 2.1
HERC4-212ENST00000505760 RPLP2P05387 115 aaKnown RBP28.17■■■□□ 2.1
HERC4-212ENST00000505760 ARP10275 920 aa28.17■■■□□ 2.1
HERC4-212ENST00000505760 INSRRP14616 1297 aa28.17■■■□□ 2.1
HERC4-212ENST00000505760 ZNF76P36508 570 aa28.17■■■□□ 2.1
HERC4-212ENST00000505760 RCAN1P53805 252 aa28.17■■■□□ 2.1
HERC4-212ENST00000505760 ACTR2P61160 394 aa28.17■■■□□ 2.1
HERC4-212ENST00000505760 MGAT3Q09327 533 aa28.17■■■□□ 2.1
HERC4-212ENST00000505760 AP3B2Q13367 1082 aa28.17■■■□□ 2.1
HERC4-212ENST00000505760 LPIN1Q14693 890 aa28.17■■■□□ 2.1
HERC4-212ENST00000505760 PTPROQ16827 1216 aa28.17■■■□□ 2.1
HERC4-212ENST00000505760 PCYT2Q99447 389 aa28.17■■■□□ 2.1
HERC4-212ENST00000505760 FAM49AQ9H0Q0 323 aaPredicted RBP28.17■■■□□ 2.1
HERC4-212ENST00000505760 CDY2AQ9Y6F7 541 aa28.17■■■□□ 2.1
HERC4-212ENST00000505760 CDC27P30260 824 aa28.16■■■□□ 2.1
HERC4-212ENST00000505760 TMEM192Q8IY95 271 aa28.16■■■□□ 2.1
HERC4-212ENST00000505760 MRPL38Q96DV4 380 aaKnown RBP28.16■■■□□ 2.1
HERC4-212ENST00000505760 IL17RAQ96F46 866 aa28.16■■■□□ 2.1
HERC4-212ENST00000505760 AGO4Q9HCK5 861 aaKnown RBP28.16■■■□□ 2.1
HERC4-212ENST00000505760 FAM217BQ9NTX9 383 aaPredicted RBP28.16■■■□□ 2.1
HERC4-212ENST00000505760 TMEM260Q9NX78 707 aa28.16■■■□□ 2.1
HERC4-212ENST00000505760 COL4A6Q14031 1691 aa28.16■■■□□ 2.1
HERC4-212ENST00000505760 RALGAPA2Q2PPJ7 1873 aa28.15■■■□□ 2.1
HERC4-212ENST00000505760 SREBF1P36956 1147 aa28.15■■■□□ 2.1
HERC4-212ENST00000505760 METAP2P50579 478 aaKnown RBP eCLIP28.15■■■□□ 2.1
HERC4-212ENST00000505760 MRPS6P82932 125 aaKnown RBP28.15■■■□□ 2.1
HERC4-212ENST00000505760 FBXO47Q5MNV8 452 aa28.15■■■□□ 2.1
HERC4-212ENST00000505760 ZBTB10Q96DT7 871 aa28.15■■■□□ 2.1
HERC4-212ENST00000505760 CCDC196A0A1B0GTZ2 297 aa28.14■■■□□ 2.1
HERC4-212ENST00000505760 MEIS1O00470 390 aa28.14■■■□□ 2.1
HERC4-212ENST00000505760 STAT5BP51692 787 aa28.14■■■□□ 2.1
HERC4-212ENST00000505760 ITGB3BPQ13352 177 aaPredicted RBP28.14■■■□□ 2.1
HERC4-212ENST00000505760 GPM6BQ13491 265 aa28.14■■■□□ 2.1
HERC4-212ENST00000505760 IER5Q5VY09 327 aa28.14■■■□□ 2.1
HERC4-212ENST00000505760 TSHZ1Q6ZSZ6 1077 aa28.14■■■□□ 2.1
HERC4-212ENST00000505760 PLPPR4Q7Z2D5 763 aa28.14■■■□□ 2.1
HERC4-212ENST00000505760 UBE2ZQ9H832 354 aaPredicted RBP28.14■■■□□ 2.1
HERC4-212ENST00000505760 H3BNC9 293 aa28.13■■■□□ 2.09
HERC4-212ENST00000505760 M0QZ92 97 aa28.13■■■□□ 2.09
HERC4-212ENST00000505760 CPA1P15085 419 aa28.13■■■□□ 2.09
HERC4-212ENST00000505760 ADD1P35611 737 aaKnown RBP28.13■■■□□ 2.09
HERC4-212ENST00000505760 CLK2P49760 499 aaKnown RBP28.13■■■□□ 2.09
HERC4-212ENST00000505760 PLCB4Q15147 1175 aa28.13■■■□□ 2.09
HERC4-212ENST00000505760 FIBCD1Q8N539 461 aa28.13■■■□□ 2.09
HERC4-212ENST00000505760 JAKMIP1Q96N16 626 aaKnown RBP28.13■■■□□ 2.09
HERC4-212ENST00000505760 LOXHD1Q8IVV2 1947 aa28.13■■■□□ 2.09
HERC4-212ENST00000505760 ENPP3O14638 875 aa28.12■■■□□ 2.09
HERC4-212ENST00000505760 APOBRQ0VD83 1088 aa28.12■■■□□ 2.09
HERC4-212ENST00000505760 PFKFB3Q16875 520 aaPredicted RBP28.12■■■□□ 2.09
HERC4-212ENST00000505760 JAKMIP3Q5VZ66 844 aa28.12■■■□□ 2.09
HERC4-212ENST00000505760 Q6ZUG5 572 aa28.12■■■□□ 2.09
HERC4-212ENST00000505760 TRAPPC12Q8WVT3 735 aa28.12■■■□□ 2.09
HERC4-212ENST00000505760 TTC3P53804 2025 aa28.11■■■□□ 2.09
HERC4-212ENST00000505760 POTEB3A0JP26 581 aa28.11■■■□□ 2.09
HERC4-212ENST00000505760 SCG2P13521 617 aa28.11■■■□□ 2.09
HERC4-212ENST00000505760 TIGD5Q53EQ6 642 aa28.11■■■□□ 2.09
HERC4-212ENST00000505760 POTEBQ6S5H4 581 aa28.11■■■□□ 2.09
HERC4-212ENST00000505760 NIPA1Q7RTP0 329 aa28.11■■■□□ 2.09
HERC4-212ENST00000505760 PCDHA2Q9Y5H9 948 aa28.11■■■□□ 2.09
HERC4-212ENST00000505760 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.1■■■□□ 2.09
HERC4-212ENST00000505760 DDX39AO00148 427 aaKnown RBP28.1■■■□□ 2.09
HERC4-212ENST00000505760 BACH1O14867 736 aa28.1■■■□□ 2.09
HERC4-212ENST00000505760 COL9A1P20849 921 aa28.1■■■□□ 2.09
HERC4-212ENST00000505760 KCNA5P22460 613 aa28.1■■■□□ 2.09
HERC4-212ENST00000505760 CD52P31358 61 aa28.1■■■□□ 2.09
HERC4-212ENST00000505760 CTNNB1P35222 781 aa28.1■■■□□ 2.09
HERC4-212ENST00000505760 SLC26A2P50443 739 aa28.1■■■□□ 2.09
HERC4-212ENST00000505760 TMEM62Q0P6H9 643 aa28.1■■■□□ 2.09
HERC4-212ENST00000505760 BLOC1S2Q6QNY1 142 aa28.1■■■□□ 2.09
HERC4-212ENST00000505760 PLA2G4DQ86XP0 818 aa28.1■■■□□ 2.09
HERC4-212ENST00000505760 CCDC12Q8WUD4 166 aaPredicted RBP28.1■■■□□ 2.09
HERC4-212ENST00000505760 BRF1Q92994 677 aa28.1■■■□□ 2.09
HERC4-212ENST00000505760 AGO3Q9H9G7 860 aaKnown RBP28.1■■■□□ 2.09
HERC4-212ENST00000505760 TRPV2Q9Y5S1 764 aa28.1■■■□□ 2.09
HERC4-212ENST00000505760 ADGRA3Q8IWK6 1321 aa28.1■■■□□ 2.09
HERC4-212ENST00000505760 ATG7O95352 703 aa28.09■■■□□ 2.09
HERC4-212ENST00000505760 FAM160B1Q5W0V3 765 aa28.09■■■□□ 2.09
HERC4-212ENST00000505760 BANK1Q8NDB2 785 aa28.09■■■□□ 2.09
HERC4-212ENST00000505760 KCNB2Q92953 911 aa28.09■■■□□ 2.09
HERC4-212ENST00000505760 C6orf50Q9HD87 102 aa28.09■■■□□ 2.09
HERC4-212ENST00000505760 RWDD3Q9Y3V2 267 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms