RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ZFHX2Q9C0A1 2572 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-213ENST00000505074 TTC3P53804 2025 aa18.44■□□□□ 0.54
PDLIM7-213ENST00000505074 CCDC69A6NI79 296 aa18.44■□□□□ 0.54
PDLIM7-213ENST00000505074 PRC1O43663 620 aa18.44■□□□□ 0.54
PDLIM7-213ENST00000505074 RGS20O76081 388 aa18.44■□□□□ 0.54
PDLIM7-213ENST00000505074 TGFB3P10600 412 aa18.44■□□□□ 0.54
PDLIM7-213ENST00000505074 UBA1P22314 1058 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-213ENST00000505074 KIF5BP33176 963 aa18.44■□□□□ 0.54
PDLIM7-213ENST00000505074 GNPTABQ3T906 1256 aa18.44■□□□□ 0.54
PDLIM7-213ENST00000505074 FAM26DQ5JW98 314 aa18.44■□□□□ 0.54
PDLIM7-213ENST00000505074 RRP36Q96EU6 259 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-213ENST00000505074 PHF7Q9BWX1 381 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-213ENST00000505074 RC3H2Q9HBD1 1191 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-213ENST00000505074 H0Y858 1186 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 NOP56O00567 594 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 DDAH1O94760 285 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 LGALS2P05162 132 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 NUBP1P53384 320 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 SP2Q02086 613 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 CAMK1Q14012 370 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 NAALADL2Q58DX5 795 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 SMARCC2Q8TAQ2 1214 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 IGDCC4Q8TDY8 1250 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 GPKOWQ92917 476 aaPredicted RBP eCLIP18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 CUL5Q93034 780 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 ZNF689Q96CS4 500 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 ASIC4Q96FT7 647 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 RPGRIP1Q96KN7 1286 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 LY9Q9HBG7 655 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 TLR9Q9NR96 1032 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 SETD4Q9NVD3 440 aa18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 USP15Q9Y4E8 981 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-213ENST00000505074 DOCK5Q9H7D0 1870 aa18.42■□□□□ 0.54
PDLIM7-213ENST00000505074 PROB1E7EW31 1015 aa18.42■□□□□ 0.54
PDLIM7-213ENST00000505074 MCM5P33992 734 aa18.42■□□□□ 0.54
PDLIM7-213ENST00000505074 ADGRD2Q7Z7M1 963 aa18.42■□□□□ 0.54
PDLIM7-213ENST00000505074 USP26Q9BXU7 913 aa18.42■□□□□ 0.54
PDLIM7-213ENST00000505074 ANO2Q9NQ90 1003 aa18.42■□□□□ 0.54
PDLIM7-213ENST00000505074 SPTBN4Q9H254 2564 aa18.42■□□□□ 0.54
PDLIM7-213ENST00000505074 ENPP3O14638 875 aa18.41■□□□□ 0.54
PDLIM7-213ENST00000505074 RXRAP19793 462 aa18.41■□□□□ 0.54
PDLIM7-213ENST00000505074 ICAM3P32942 547 aa18.41■□□□□ 0.54
PDLIM7-213ENST00000505074 NRIP1P48552 1158 aa18.41■□□□□ 0.54
PDLIM7-213ENST00000505074 ERMP1Q7Z2K6 904 aa18.41■□□□□ 0.54
PDLIM7-213ENST00000505074 RAB11FIP4Q86YS3 637 aa18.41■□□□□ 0.54
PDLIM7-213ENST00000505074 SPPL3Q8TCT6 385 aa18.41■□□□□ 0.54
PDLIM7-213ENST00000505074 SPZ1Q9BXG8 430 aa18.41■□□□□ 0.54
PDLIM7-213ENST00000505074 RTEL1Q9NZ71 1219 aa18.41■□□□□ 0.54
PDLIM7-213ENST00000505074 BARX2Q9UMQ3 279 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-213ENST00000505074 CACNA1HO95180 2353 aa18.41■□□□□ 0.54
PDLIM7-213ENST00000505074 PLXNA4Q9HCM2 1894 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 SLC27A2O14975 620 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 DGKIO75912 1065 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 ITGB1P05556 798 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 GHRP10912 638 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 DNAJB1P25685 340 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 GNAQP50148 359 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 ARHGAP4P98171 946 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 SP4Q02446 784 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 PTPN21Q16825 1174 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 ASCL5Q7RTU5 278 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 RBM23Q86U06 439 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 TMEM87BQ96K49 555 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 MAP3K14Q99558 947 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 LZTS2Q9BRK4 669 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 ESYT1Q9BSJ8 1104 aa18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 LSG1Q9H089 658 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 PTPRZ1P23471 2315 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-213ENST00000505074 SH2B2O14492 632 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 STAM2O75886 525 aa18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 PLEKHA8P1O95397 391 aa18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 GLP2RO95838 553 aa18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 CHRNA1P02708 482 aa18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 ATF7P17544 494 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 USP17L6PQ6QN14 398 aa18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 CYFIP1Q7L576 1253 aa18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 CMTR1Q8N1G2 835 aaKnown RBP18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 TMTC2Q8N394 836 aa18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 POF1BQ8WVV4 589 aa18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 LRRC2Q9BYS8 371 aa18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 EHMT1Q9H9B1 1298 aa18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 MRPL42Q9Y6G3 142 aaKnown RBP18.39■□□□□ 0.53
PDLIM7-213ENST00000505074 FIBPO43427 364 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 GALR2O43603 387 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 CALM1P0DP23 149 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 CALM2P0DP24 149 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 CALM3P0DP25 149 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 ADAM17P78536 824 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 MRPS9P82933 396 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 NEDD9Q14511 834 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 CREB3L3Q68CJ9 461 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 ZBTB33Q86T24 672 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 CMTR2Q8IYT2 770 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 CCDC82Q8N4S0 544 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 KLHL23Q8NBE8 558 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 LMBR1Q8WVP7 490 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 RIPOR3Q96MK2 946 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 MTA3Q9BTC8 594 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 TRPC6Q9Y210 931 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms