RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 PSMD10O75832 226 aa23.36■■□□□ 1.33
DDR1-255ENST00000504927 SFNP31947 248 aa23.36■■□□□ 1.33
DDR1-255ENST00000504927 GNL2Q13823 731 aaKnown RBP23.36■■□□□ 1.33
DDR1-255ENST00000504927 CTAGE1Q96RT6 745 aa23.36■■□□□ 1.33
DDR1-255ENST00000504927 ZNF302Q9NR11 478 aa23.36■■□□□ 1.33
DDR1-255ENST00000504927 SETD4Q9NVD3 440 aa23.36■■□□□ 1.33
DDR1-255ENST00000504927 SAMM50Q9Y512 469 aa23.36■■□□□ 1.33
DDR1-255ENST00000504927 RRN3P2A6NIE6 340 aa23.35■■□□□ 1.33
DDR1-255ENST00000504927 BAG4O95429 457 aaKnown RBP23.35■■□□□ 1.33
DDR1-255ENST00000504927 MARK3P27448 753 aa23.35■■□□□ 1.33
DDR1-255ENST00000504927 GJB2P29033 226 aa23.35■■□□□ 1.33
DDR1-255ENST00000504927 JAK3P52333 1124 aa23.35■■□□□ 1.33
DDR1-255ENST00000504927 SWSAP1Q6NVH7 229 aa23.35■■□□□ 1.33
DDR1-255ENST00000504927 RPUSD2Q8IZ73 545 aaKnown RBP23.35■■□□□ 1.33
DDR1-255ENST00000504927 RDM1Q8NG50 284 aa23.35■■□□□ 1.33
DDR1-255ENST00000504927 KCNMB3Q9NPA1 279 aa23.35■■□□□ 1.33
DDR1-255ENST00000504927 DISC1Q9NRI5 854 aa23.35■■□□□ 1.33
DDR1-255ENST00000504927 DOCK5Q9H7D0 1870 aa23.34■■□□□ 1.33
DDR1-255ENST00000504927 SLC37A4O43826 429 aa23.34■■□□□ 1.33
DDR1-255ENST00000504927 MARCH6O60337 910 aa23.34■■□□□ 1.33
DDR1-255ENST00000504927 PARNO95453 639 aaKnown RBP23.34■■□□□ 1.33
DDR1-255ENST00000504927 CSF2RAP15509 400 aa23.34■■□□□ 1.33
DDR1-255ENST00000504927 RFC2P35250 354 aa23.34■■□□□ 1.33
DDR1-255ENST00000504927 CCL23P55773 120 aa23.34■■□□□ 1.33
DDR1-255ENST00000504927 ZNF200P98182 395 aaPredicted RBP23.34■■□□□ 1.33
DDR1-255ENST00000504927 RBL2Q08999 1139 aa23.34■■□□□ 1.33
DDR1-255ENST00000504927 PPFIA1Q13136 1202 aa23.34■■□□□ 1.33
DDR1-255ENST00000504927 CUL4AQ13619 759 aa23.34■■□□□ 1.33
DDR1-255ENST00000504927 HIC1Q14526 733 aa23.34■■□□□ 1.33
DDR1-255ENST00000504927 SERINC5Q86VE9 423 aa23.34■■□□□ 1.33
DDR1-255ENST00000504927 SLFN12Q8IYM2 578 aa23.34■■□□□ 1.33
DDR1-255ENST00000504927 MAFBQ9Y5Q3 323 aaPredicted RBP23.34■■□□□ 1.33
DDR1-255ENST00000504927 POTEB3A0JP26 581 aa23.33■■□□□ 1.33
DDR1-255ENST00000504927 FAM205CA6NFA0 338 aa23.33■■□□□ 1.33
DDR1-255ENST00000504927 U2AF2P26368 475 aaKnown RBP eCLIP23.33■■□□□ 1.33
DDR1-255ENST00000504927 ADAM17P78536 824 aa23.33■■□□□ 1.33
DDR1-255ENST00000504927 PLCB4Q15147 1175 aa23.33■■□□□ 1.33
DDR1-255ENST00000504927 PDXDC2PQ6P474 469 aa23.33■■□□□ 1.33
DDR1-255ENST00000504927 POTEBQ6S5H4 581 aa23.33■■□□□ 1.33
DDR1-255ENST00000504927 NOSTRINQ8IVI9 506 aa23.33■■□□□ 1.33
DDR1-255ENST00000504927 WNT8AQ9H1J5 351 aa23.33■■□□□ 1.33
DDR1-255ENST00000504927 IL23AQ9NPF7 189 aa23.33■■□□□ 1.33
DDR1-255ENST00000504927 UMODL1Q5DID0 1318 aa23.33■■□□□ 1.32
DDR1-255ENST00000504927 SOX1O00570 391 aaPredicted RBP23.32■■□□□ 1.32
DDR1-255ENST00000504927 TREHO43280 583 aa23.32■■□□□ 1.32
DDR1-255ENST00000504927 HBP1O60381 514 aa23.32■■□□□ 1.32
DDR1-255ENST00000504927 IQCF3P0C7M6 154 aa23.32■■□□□ 1.32
DDR1-255ENST00000504927 SELPP16109 830 aa23.32■■□□□ 1.32
DDR1-255ENST00000504927 GRIK4Q16099 956 aa23.32■■□□□ 1.32
DDR1-255ENST00000504927 B3GNT9Q6UX72 402 aa23.32■■□□□ 1.32
DDR1-255ENST00000504927 CCDC60Q8IWA6 550 aaPredicted RBP23.32■■□□□ 1.32
DDR1-255ENST00000504927 LMBR1Q8WVP7 490 aa23.32■■□□□ 1.32
DDR1-255ENST00000504927 SNX21Q969T3 373 aa23.32■■□□□ 1.32
DDR1-255ENST00000504927 UNC45AQ9H3U1 944 aa23.32■■□□□ 1.32
DDR1-255ENST00000504927 TRPC6Q9Y210 931 aa23.32■■□□□ 1.32
DDR1-255ENST00000504927 CAND2O75155 1236 aa23.31■■□□□ 1.32
DDR1-255ENST00000504927 RPLP2P05387 115 aaKnown RBP23.31■■□□□ 1.32
DDR1-255ENST00000504927 PFKMP08237 780 aa23.31■■□□□ 1.32
DDR1-255ENST00000504927 CKBP12277 381 aa23.31■■□□□ 1.32
DDR1-255ENST00000504927 INSRRP14616 1297 aa23.31■■□□□ 1.32
DDR1-255ENST00000504927 TRAPPC10P48553 1259 aa23.31■■□□□ 1.32
DDR1-255ENST00000504927 ORC2Q13416 577 aaPredicted RBP23.31■■□□□ 1.32
DDR1-255ENST00000504927 TAF2Q6P1X5 1199 aa23.31■■□□□ 1.32
DDR1-255ENST00000504927 MIER3Q7Z3K6 550 aa23.31■■□□□ 1.32
DDR1-255ENST00000504927 ATP8B4Q8TF62 1192 aa23.31■■□□□ 1.32
DDR1-255ENST00000504927 DHX38Q92620 1227 aaKnown RBP23.31■■□□□ 1.32
DDR1-255ENST00000504927 HAS1Q92839 578 aa23.31■■□□□ 1.32
DDR1-255ENST00000504927 GJA10Q969M2 543 aa23.31■■□□□ 1.32
DDR1-255ENST00000504927 GABBR1Q9UBS5 961 aa23.31■■□□□ 1.32
DDR1-255ENST00000504927 MBLAC1A4D2B0 266 aaPredicted RBP23.3■■□□□ 1.32
DDR1-255ENST00000504927 H3BQV1 296 aa23.3■■□□□ 1.32
DDR1-255ENST00000504927 CHMP2AO43633 222 aa23.3■■□□□ 1.32
DDR1-255ENST00000504927 EPHB4P54760 987 aa23.3■■□□□ 1.32
DDR1-255ENST00000504927 PPP2R5CQ13362 524 aa23.3■■□□□ 1.32
DDR1-255ENST00000504927 SHHQ15465 462 aa23.3■■□□□ 1.32
DDR1-255ENST00000504927 TRIM71Q2Q1W2 868 aaKnown RBP23.3■■□□□ 1.32
DDR1-255ENST00000504927 LARP1BQ659C4 914 aaKnown RBP23.3■■□□□ 1.32
DDR1-255ENST00000504927 PSRC1Q6PGN9 363 aaPredicted RBP23.3■■□□□ 1.32
DDR1-255ENST00000504927 CKAP2LQ8IYA6 745 aa23.3■■□□□ 1.32
DDR1-255ENST00000504927 BBXQ8WY36 941 aaPredicted RBP23.3■■□□□ 1.32
DDR1-255ENST00000504927 INTS4Q96HW7 963 aaKnown RBP23.3■■□□□ 1.32
DDR1-255ENST00000504927 SCLYQ96I15 445 aa23.3■■□□□ 1.32
DDR1-255ENST00000504927 NOL7Q9UMY1 257 aaKnown RBP23.3■■□□□ 1.32
DDR1-255ENST00000504927 K7ELQ4 463 aaPredicted RBP23.29■■□□□ 1.32
DDR1-255ENST00000504927 NEMFO60524 1076 aa23.29■■□□□ 1.32
DDR1-255ENST00000504927 LRIT3Q3SXY7 679 aa23.29■■□□□ 1.32
DDR1-255ENST00000504927 ZNF484Q5JVG2 852 aa23.29■■□□□ 1.32
DDR1-255ENST00000504927 LRRC8DQ7L1W4 858 aa23.29■■□□□ 1.32
DDR1-255ENST00000504927 C16orf59Q7L2K0 433 aa23.29■■□□□ 1.32
DDR1-255ENST00000504927 RPAINQ86UA6 219 aa23.29■■□□□ 1.32
DDR1-255ENST00000504927 POTEDQ86YR6 584 aa23.29■■□□□ 1.32
DDR1-255ENST00000504927 FAM167AQ96KS9 214 aa23.29■■□□□ 1.32
DDR1-255ENST00000504927 NRBP2Q9NSY0 501 aa23.29■■□□□ 1.32
DDR1-255ENST00000504927 TUBE1Q9UJT0 475 aa23.29■■□□□ 1.32
DDR1-255ENST00000504927 FGBP02675 491 aa23.28■■□□□ 1.32
DDR1-255ENST00000504927 ATP4AP20648 1035 aa23.28■■□□□ 1.32
DDR1-255ENST00000504927 THPOP40225 353 aa23.28■■□□□ 1.32
DDR1-255ENST00000504927 CALCRLQ16602 461 aa23.28■■□□□ 1.32
DDR1-255ENST00000504927 TMEM240Q5SV17 173 aa23.28■■□□□ 1.32
DDR1-255ENST00000504927 C9orf50Q5SZB4 431 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms