RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 SORBS3O60504 671 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 EIF3JO75822 258 aaKnown RBP9.9□□□□□ -0.82
CDH6-202ENST00000504835 NR3C2P08235 984 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 ERVK-21P61565 698 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 SP2Q02086 613 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 PTK7Q13308 1070 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 DGKDQ16760 1214 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 KIAA0753Q2KHM9 967 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 ASPRV1Q53RT3 343 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 ZNF618Q5T7W0 954 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 ARHGEF16Q5VV41 709 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDH6-202ENST00000504835 FBXO11Q86XK2 927 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 PLEKHM2Q8IWE5 1019 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 SMC5Q8IY18 1101 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 IL31RAQ8NI17 732 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 PPTC7Q8NI37 304 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 GPKOWQ92917 476 aaPredicted RBP eCLIP9.9□□□□□ -0.82
CDH6-202ENST00000504835 MTMR8Q96EF0 704 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 PHOX2BQ99453 314 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 LRFN3Q9BTN0 628 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 C1QTNF1Q9BXJ1 281 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 OSBPL7Q9BZF2 842 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 KAT14Q9H8E8 782 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 VAT1LQ9HCJ6 419 aa9.9□□□□□ -0.82
CDH6-202ENST00000504835 MRPL11Q9Y3B7 192 aaKnown RBP9.9□□□□□ -0.82
CDH6-202ENST00000504835 COL4A6Q14031 1691 aa9.9□□□□□ -0.83
CDH6-202ENST00000504835 ABHD14A-ACY1A0A1B0GW23 586 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 GPR37O15354 613 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 CFBP00751 764 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 PARP1P09874 1014 aaKnown RBP9.89□□□□□ -0.83
CDH6-202ENST00000504835 LORP23490 312 aaPredicted RBP9.89□□□□□ -0.83
CDH6-202ENST00000504835 USP46P62068 366 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 SEC23AQ15436 765 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 HSDL1Q3SXM5 330 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 MYSM1Q5VVJ2 828 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 FAM117BQ6P1L5 589 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 CWC27Q6UX04 472 aaKnown RBP9.89□□□□□ -0.83
CDH6-202ENST00000504835 IQCA1Q86XH1 822 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 MCF2L2Q86YR7 1114 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 C7orf31Q8N865 590 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 PDCD2LQ9BRP1 358 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 OSBPL3Q9H4L5 887 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 BCAS3Q9H6U6 928 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 LMCD1Q9NZU5 365 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 MTUS1Q9ULD2 1270 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 MRVI1Q9Y6F6 885 aa9.89□□□□□ -0.83
CDH6-202ENST00000504835 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.88□□□□□ -0.83
CDH6-202ENST00000504835 PARNO95453 639 aaKnown RBP9.88□□□□□ -0.83
CDH6-202ENST00000504835 CD46P15529 392 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 HOXC8P31273 242 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 LAMC2Q13753 1193 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 PGM5Q15124 567 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 CCDC178Q5BJE1 867 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 B4GALNT3Q6L9W6 998 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 STOX1Q6ZVD7 989 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 CYB5R4Q7L1T6 521 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 DHX37Q8IY37 1157 aaKnown RBP9.88□□□□□ -0.83
CDH6-202ENST00000504835 EHBP1Q8NDI1 1231 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 FAM122AQ96E09 287 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 TGS1Q96RS0 853 aaKnown RBP9.88□□□□□ -0.83
CDH6-202ENST00000504835 RAD9AQ99638 391 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 C17orf80Q9BSJ5 609 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 C16orf70Q9BSU1 422 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 KATNAL1Q9BW62 490 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 SLC24A3Q9HC58 644 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 MAD2L2Q9UI95 211 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 DHX16O60231 1041 aaKnown RBP9.88□□□□□ -0.83
CDH6-202ENST00000504835 LGR5O75473 907 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 GGPS1O95749 300 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 IGHDP01880 384 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 MYCLP12524 364 aaPredicted RBP9.88□□□□□ -0.83
CDH6-202ENST00000504835 UBA1P22314 1058 aaKnown RBP9.88□□□□□ -0.83
CDH6-202ENST00000504835 HOXA13P31271 388 aaPredicted RBP9.88□□□□□ -0.83
CDH6-202ENST00000504835 NT5C2P49902 561 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 MFAP1P55081 439 aaKnown RBP9.88□□□□□ -0.83
CDH6-202ENST00000504835 HTRA4P83105 476 aaPredicted RBP9.88□□□□□ -0.83
CDH6-202ENST00000504835 IKBKEQ14164 716 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 CELF3Q5SZQ8 465 aaKnown RBP9.88□□□□□ -0.83
CDH6-202ENST00000504835 SERINC5Q86VE9 423 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 VSIG10LQ86VR7 867 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 DBF4BQ8NFT6 615 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 DSCC1Q9BVC3 393 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 AMNQ9BXJ7 453 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 UBE2ZQ9H832 354 aaPredicted RBP9.88□□□□□ -0.83
CDH6-202ENST00000504835 TELO2Q9Y4R8 837 aa9.88□□□□□ -0.83
CDH6-202ENST00000504835 TTC3P53804 2025 aa9.87□□□□□ -0.83
CDH6-202ENST00000504835 WDR81Q562E7 1941 aa9.87□□□□□ -0.83
CDH6-202ENST00000504835 PALM3A6NDB9 673 aaPredicted RBP9.87□□□□□ -0.83
CDH6-202ENST00000504835 FAM86C2PA6NEL3 165 aa9.87□□□□□ -0.83
CDH6-202ENST00000504835 KLRF2D3W0D1 207 aa9.87□□□□□ -0.83
CDH6-202ENST00000504835 NUCB1Q02818 461 aa9.87□□□□□ -0.83
CDH6-202ENST00000504835 PLEKHG4Q58EX7 1191 aa9.87□□□□□ -0.83
CDH6-202ENST00000504835 TRIM46Q7Z4K8 759 aa9.87□□□□□ -0.83
CDH6-202ENST00000504835 CHD1LQ86WJ1 897 aa9.87□□□□□ -0.83
CDH6-202ENST00000504835 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.87□□□□□ -0.83
CDH6-202ENST00000504835 SPATA33Q96N06 139 aa9.87□□□□□ -0.83
CDH6-202ENST00000504835 MUC6Q6W4X9 2439 aa9.87□□□□□ -0.83
CDH6-202ENST00000504835 ZBTB5O15062 677 aa9.86□□□□□ -0.83
CDH6-202ENST00000504835 TREHO43280 583 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms