RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 IRF2BP1Q8IU81 584 aa14.77□□□□□ -0.05
LMNA-220ENST00000504687 MYOCDQ8IZQ8 938 aa14.77□□□□□ -0.05
LMNA-220ENST00000504687 CCDC150Q8NCX0 1101 aa14.77□□□□□ -0.05
LMNA-220ENST00000504687 NAP1L5Q96NT1 182 aaPredicted RBP14.77□□□□□ -0.05
LMNA-220ENST00000504687 MPHOSPH6Q99547 160 aaKnown RBP14.77□□□□□ -0.05
LMNA-220ENST00000504687 DUSP9Q99956 384 aaKnown RBP14.77□□□□□ -0.05
LMNA-220ENST00000504687 LXNQ9BS40 222 aa14.77□□□□□ -0.05
LMNA-220ENST00000504687 BHMT2Q9H2M3 363 aa14.77□□□□□ -0.05
LMNA-220ENST00000504687 ANKEF1Q9NU02 776 aa14.77□□□□□ -0.05
LMNA-220ENST00000504687 INTS13Q9NVM9 706 aa14.77□□□□□ -0.05
LMNA-220ENST00000504687 MORF4L1Q9UBU8 362 aa14.77□□□□□ -0.05
LMNA-220ENST00000504687 TCEAL9Q9UHQ7 104 aa14.77□□□□□ -0.05
LMNA-220ENST00000504687 COL4A3BPQ9Y5P4 624 aa14.77□□□□□ -0.05
LMNA-220ENST00000504687 ASTN1O14525 1302 aa14.76□□□□□ -0.05
LMNA-220ENST00000504687 ITIH6Q6UXX5 1313 aa14.76□□□□□ -0.05
LMNA-220ENST00000504687 TESPA1A2RU30 521 aaPredicted RBP14.76□□□□□ -0.05
LMNA-220ENST00000504687 POTEB2H3BUK9 544 aa14.76□□□□□ -0.05
LMNA-220ENST00000504687 ITGBL1O95965 494 aaPredicted RBP14.76□□□□□ -0.05
LMNA-220ENST00000504687 TGFB3P10600 412 aa14.76□□□□□ -0.05
LMNA-220ENST00000504687 IDEP14735 1019 aa14.76□□□□□ -0.05
LMNA-220ENST00000504687 MSNP26038 577 aaKnown RBP14.76□□□□□ -0.05
LMNA-220ENST00000504687 CYP4A11Q02928 519 aa14.76□□□□□ -0.05
LMNA-220ENST00000504687 TBX2Q13207 712 aaPredicted RBP14.76□□□□□ -0.05
LMNA-220ENST00000504687 CTTNQ14247 550 aaKnown RBP14.76□□□□□ -0.05
LMNA-220ENST00000504687 CCDC144BQ3MJ40 725 aa14.76□□□□□ -0.05
LMNA-220ENST00000504687 SPRYD7Q5W111 196 aa14.76□□□□□ -0.05
LMNA-220ENST00000504687 EPM2AIP1Q7L775 607 aaPredicted RBP14.76□□□□□ -0.05
LMNA-220ENST00000504687 TPH2Q8IWU9 490 aa14.76□□□□□ -0.05
LMNA-220ENST00000504687 ZC3H3Q8IXZ2 948 aaKnown RBP14.76□□□□□ -0.05
LMNA-220ENST00000504687 SPC24Q8NBT2 197 aa14.76□□□□□ -0.05
LMNA-220ENST00000504687 REEP2Q9BRK0 252 aa14.76□□□□□ -0.05
LMNA-220ENST00000504687 ZCCHC17Q9NP64 241 aaKnown RBP14.76□□□□□ -0.05
LMNA-220ENST00000504687 RTN4Q9NQC3 1192 aaKnown RBP14.76□□□□□ -0.05
LMNA-220ENST00000504687 ZNFX1Q9P2E3 1918 aaKnown RBP14.76□□□□□ -0.05
LMNA-220ENST00000504687 ZNF236Q9UL36 1845 aa14.76□□□□□ -0.05
LMNA-220ENST00000504687 UBE4BO95155 1302 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 EIF3DO15371 548 aaKnown RBP eCLIP14.75□□□□□ -0.05
LMNA-220ENST00000504687 ATP9AO75110 1047 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 ATG7O95352 703 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 SSBP05455 408 aaKnown RBP eCLIP14.75□□□□□ -0.05
LMNA-220ENST00000504687 MAPTP10636 758 aaKnown RBP14.75□□□□□ -0.05
LMNA-220ENST00000504687 ERCC3P19447 782 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 KCNJ6P48051 423 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 PMS1P54277 932 aaKnown RBP14.75□□□□□ -0.05
LMNA-220ENST00000504687 PSMC5P62195 406 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 ERVK-9P63128 1117 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 ERVK-24P63145 666 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 ANKRD40Q6AI12 368 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 KCNV1Q6PIU1 500 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 NCAPG2Q86XI2 1143 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 LRRC8AQ8IWT6 810 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 ABRAQ8N0Z2 381 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 CSGALNACT2Q8N6G5 542 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 TRIM47Q96LD4 638 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 PURBQ96QR8 312 aaKnown RBP14.75□□□□□ -0.05
LMNA-220ENST00000504687 UIMC1Q96RL1 719 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 KCNF1Q9H3M0 494 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 SEMA6BQ9H3T3 888 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 TXNRD2Q9NNW7 524 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 SLC39A2Q9NP94 309 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 WRAP73Q9P2S5 460 aaPredicted RBP14.75□□□□□ -0.05
LMNA-220ENST00000504687 PCDHA10Q9Y5I2 948 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 ARID2Q68CP9 1835 aa14.75□□□□□ -0.05
LMNA-220ENST00000504687 SOWAHBA6NEL2 793 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 KCNJ18B7U540 433 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 CHMP2AO43633 222 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 CCNE2O96020 404 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 KRT18P05783 430 aaKnown RBP14.74□□□□□ -0.05
LMNA-220ENST00000504687 PRKCSHP14314 528 aaPredicted RBP14.74□□□□□ -0.05
LMNA-220ENST00000504687 PTGS1P23219 599 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 CLCN1P35523 988 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 CCNA1P78396 465 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 KCNJ12Q14500 433 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 KRT31Q15323 416 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 NFIL3Q16649 462 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 EDRF1Q3B7T1 1238 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 HERC4Q5GLZ8 1057 aaPredicted RBP14.74□□□□□ -0.05
LMNA-220ENST00000504687 SPECC1LQ69YQ0 1117 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 CHADLQ6NUI6 762 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 ZNF507Q8TCN5 953 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 TSG101Q99816 390 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 RUSC1Q9BVN2 902 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 KCND1Q9NSA2 647 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 NRBP1Q9UHY1 535 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 MAPK8IP1Q9UQF2 711 aa14.74□□□□□ -0.05
LMNA-220ENST00000504687 PLXNB2O15031 1838 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 MYH11P35749 1972 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 CCL15-CCL14A0A0B4J2E2 113 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 A0A1W2PQC6 194 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 TRIM49BA6NDI0 452 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 TOMM70O94826 608 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 CELF2O95319 508 aaKnown RBP14.73□□□□□ -0.05
LMNA-220ENST00000504687 COPB1P53618 953 aaKnown RBP14.73□□□□□ -0.05
LMNA-220ENST00000504687 MARSP56192 900 aaKnown RBP14.73□□□□□ -0.05
LMNA-220ENST00000504687 ALCAMQ13740 583 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 KCTD2Q14681 263 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 CCL15Q16663 113 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 Q3C1V9 767 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 TMC6Q7Z403 805 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 PIGOQ8TEQ8 1089 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms