RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 AATKQ6ZMQ8 1374 aa6.54□□□□□ -1.36
LINC02397-201ENST00000504409 KCNJ18B7U540 433 aa6.54□□□□□ -1.36
LINC02397-201ENST00000504409 ESRRAP11474 423 aaPredicted RBP6.54□□□□□ -1.36
LINC02397-201ENST00000504409 LSP1P33241 339 aa6.54□□□□□ -1.36
LINC02397-201ENST00000504409 KCNJ12Q14500 433 aa6.54□□□□□ -1.36
LINC02397-201ENST00000504409 PDCD4Q53EL6 469 aaKnown RBP6.54□□□□□ -1.36
LINC02397-201ENST00000504409 RBM43Q6ZSC3 357 aaKnown RBP6.54□□□□□ -1.36
LINC02397-201ENST00000504409 SNIP1Q8TAD8 396 aaKnown RBP6.54□□□□□ -1.36
LINC02397-201ENST00000504409 RHPN1Q8TCX5 695 aa6.54□□□□□ -1.36
LINC02397-201ENST00000504409 TEX12Q9BXU0 123 aa6.54□□□□□ -1.36
LINC02397-201ENST00000504409 HMG20AQ9NP66 347 aa6.54□□□□□ -1.36
LINC02397-201ENST00000504409 KRT10P13645 584 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 MLH1P40692 756 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 NSFP46459 744 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 TRPC1P48995 793 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 FAM133BQ5BKY9 247 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 PDZD4Q76G19 769 aaPredicted RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 ACRBPQ8NEB7 543 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 ERLEC1Q96DZ1 483 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 NOD2Q9HC29 1040 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 C6orf50Q9HD87 102 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 SNX5Q9Y5X3 404 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 MAP3K4Q9Y6R4 1608 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 ACAT1P24752 427 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 SGSM1Q2NKQ1 1148 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 RNF207Q6ZRF8 634 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 EXOC8Q8IYI6 725 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 SCAIQ8N9R8 606 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 DRAXINQ8NBI3 349 aaPredicted RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 MCM8Q9UJA3 840 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 BICRAQ9NZM4 1560 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 CDH16O75309 829 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 PARP1P09874 1014 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 PLCG2P16885 1265 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 E2F4Q16254 413 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 SYT2Q8N9I0 419 aaPredicted RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 CALML6Q8TD86 181 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 DDX25Q9UHL0 483 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 FMNL1O95466 1100 aaPredicted RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 MAGEA1P43355 309 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 AOC3Q16853 763 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 MPRIPQ6WCQ1 1025 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 MYOCDQ8IZQ8 938 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 NOA1Q8NC60 698 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 SEPT1Q8WYJ6 367 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 PHF11Q9UIL8 331 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 FAM83GA6ND36 823 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 TMEM110-MUSTN1A8MSY1 372 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 TRPA1O75762 1119 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 MRPL28Q13084 256 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 THOC5Q13769 683 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 NEK8Q86SG6 692 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 ZNF554Q86TJ5 538 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 TMEM110Q86TL2 294 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 TTC13Q8NBP0 860 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 TMIEQ8NEW7 156 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 CHAMP1Q96JM3 812 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 ANKFY1Q9P2R3 1169 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 ANGEL1Q9UNK9 670 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 TPP2P29144 1249 aaPredicted RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 WTAPQ15007 396 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 SLC39A14Q15043 492 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 FOXD1Q16676 465 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 GNPTABQ3T906 1256 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 PNPT1Q8TCS8 783 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 PYROXD1Q8WU10 500 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 ATXN2LQ8WWM7 1075 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 CCDC90BQ9GZT6 254 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 HPCAL4Q9UM19 191 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 CAB39Q9Y376 341 aaPredicted RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 TMEM191CA6NGB0 347 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 B4DLN1 442 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 TMEM191BP0C7N4 346 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 CDC27P30260 824 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 KRT79Q5XKE5 535 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 ADCK1Q86TW2 530 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 CRLF3Q8IUI8 442 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 PEX5LQ8IYB4 626 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 NDUFA10O95299 355 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 MATR3P43243 847 aaKnown RBP eCLIP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 MTTPP55157 894 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 TMEM126BQ8IUX1 230 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 PBXIP1Q96AQ6 731 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 TMX1Q9H3N1 280 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 PIH1D3Q9NQM4 214 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 IPO11Q9UI26 975 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 CNOT7Q9UIV1 285 aaKnown RBP6.53□□□□□ -1.36
LINC02397-201ENST00000504409 ZFP69BQ9UJL9 534 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 MROH7Q68CQ1 1323 aa6.53□□□□□ -1.36
LINC02397-201ENST00000504409 SETD1AO15047 1707 aaKnown RBP6.52□□□□□ -1.36
LINC02397-201ENST00000504409 EFCAB14O75071 495 aa6.52□□□□□ -1.36
LINC02397-201ENST00000504409 PDE9AO76083 593 aa6.52□□□□□ -1.36
LINC02397-201ENST00000504409 HEXIM1O94992 359 aaKnown RBP6.52□□□□□ -1.36
LINC02397-201ENST00000504409 KCNA2P16389 499 aa6.52□□□□□ -1.36
LINC02397-201ENST00000504409 B3GNT6Q6ZMB0 384 aa6.52□□□□□ -1.36
LINC02397-201ENST00000504409 ABTB1Q969K4 478 aaPredicted RBP6.52□□□□□ -1.36
LINC02397-201ENST00000504409 ABCB6Q9NP58 842 aa6.52□□□□□ -1.36
LINC02397-201ENST00000504409 SPG7Q9UQ90 795 aa6.52□□□□□ -1.36
LINC02397-201ENST00000504409 MFAP3LO75121 409 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 TSGA10IPQ3SY00 556 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms