RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 ZSWIM4Q9H7M6 989 aa15.52■□□□□ 0.08
CYSTM1-202ENST00000504227 RGL1Q9NZL6 768 aa15.52■□□□□ 0.08
CYSTM1-202ENST00000504227 DDX20Q9UHI6 824 aaKnown RBP15.52■□□□□ 0.08
CYSTM1-202ENST00000504227 HPSEQ9Y251 543 aa15.52■□□□□ 0.08
CYSTM1-202ENST00000504227 TELO2Q9Y4R8 837 aa15.52■□□□□ 0.08
CYSTM1-202ENST00000504227 MED24O75448 989 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 SLITRK3O94933 977 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 SPATA31C1P0DKV0 1188 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 LIG1P18858 919 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 PTGS1P23219 599 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 TCF7P36402 384 aaPredicted RBP15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 CPT1AP50416 773 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 GJA9P57773 515 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 CYP4A11Q02928 519 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 CTTNQ14247 550 aaKnown RBP15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 DGKDQ16760 1214 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 HYIQ5T013 277 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 UTP14CQ5TAP6 766 aaKnown RBP15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 KCTD17Q8N5Z5 321 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 IQUBQ8NA54 791 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 PLIN2Q99541 437 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 ZNF302Q9NR11 478 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 GABBR1Q9UBS5 961 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 USP25Q9UHP3 1055 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 KIAA1024Q9UPX6 916 aa15.51■□□□□ 0.07
CYSTM1-202ENST00000504227 IGKV6D-21A0A0A0MT36 114 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 A6NJR5 290 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 POLR2DO15514 142 aaKnown RBP15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 ZEB2O60315 1214 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 LGR5O75473 907 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 ZNF202O95125 648 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 MMP3P08254 477 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 PLCG1P19174 1290 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 STAT6P42226 847 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 STAT5BP51692 787 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 GRB10Q13322 594 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 FSCN1Q16658 493 aaKnown RBP15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 SKOR2Q2VWA4 1001 aaPredicted RBP15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 PDXDC2PQ6P474 469 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 BANK1Q8NDB2 785 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 ENGASEQ8NFI3 743 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 GLG1Q92896 1179 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 DHX58Q96C10 678 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 PNMA5Q96PV4 448 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 NACC1Q96RE7 527 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 LXNQ9BS40 222 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 UPF3AQ9H1J1 476 aaKnown RBP15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 SMARCAD1Q9H4L7 1026 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 XPNPEP3Q9NQH7 507 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 DDX19AQ9NUU7 478 aaKnown RBP15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 DNM3Q9UQ16 869 aa15.5■□□□□ 0.07
CYSTM1-202ENST00000504227 DOCK5Q9H7D0 1870 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 A0A087X0B3 334 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 POTEB3A0JP26 581 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 POTEFA5A3E0 1075 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 KPNA6O60684 536 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 KINO60870 393 aaKnown RBP15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 NR1I2O75469 434 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 LYPLA2O95372 231 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 C6orf222P0C671 652 aaPredicted RBP15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 ECM1Q16610 540 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 TMEM119Q4V9L6 283 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 GNASQ5JWF2 1037 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 POTEBQ6S5H4 581 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 PLPPR4Q7Z2D5 763 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 CCDC60Q8IWA6 550 aaPredicted RBP15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 CKAP2LQ8IYA6 745 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 FMR1NBQ8N0W7 255 aaPredicted RBP15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 AFAP1L1Q8TED9 768 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 CCDC34Q96HJ3 373 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 UNC93B1Q9H1C4 597 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 CUEDC2Q9H467 287 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 STK17AQ9UEE5 414 aa15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 MAFBQ9Y5Q3 323 aaPredicted RBP15.49■□□□□ 0.07
CYSTM1-202ENST00000504227 SYNRGQ9UMZ2 1314 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 PGK1P00558 417 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 MYL3P08590 195 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 XRCC6P12956 609 aaKnown RBP eCLIP15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 HOXD8P13378 290 aaPredicted RBP15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 CCL5P13501 91 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 SLC26A2P50443 739 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 NKX3-2P78367 333 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 BEX3Q00994 111 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 SNW1Q13573 536 aaKnown RBP15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 UGCGQ16739 394 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 POTEGQ6S5H5 508 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 OTUD6AQ7L8S5 288 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 C4orf19Q8IY42 314 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 CEP57L1Q8IYX8 460 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 GPT2Q8TD30 523 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 PCYT2Q99447 389 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 RNF208Q9H0X6 261 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 NRBP2Q9NSY0 501 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 DACT1Q9NYF0 836 aa15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 ZNF215Q9UL58 517 aaPredicted RBP15.48■□□□□ 0.07
CYSTM1-202ENST00000504227 EMSYQ7Z589 1322 aa15.47■□□□□ 0.07
CYSTM1-202ENST00000504227 IGSF9BQ9UPX0 1349 aa15.47■□□□□ 0.07
CYSTM1-202ENST00000504227 MYCP01106 439 aaPredicted RBP15.47■□□□□ 0.07
CYSTM1-202ENST00000504227 MYCNP04198 464 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms