RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 GNPATO15228 680 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 SLC26A4O43511 780 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 PARP1P09874 1014 aaKnown RBP4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 HSPA8P11142 646 aaKnown RBP4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 ATP5JP18859 108 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 CYP7A1P22680 504 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 CETN2P41208 172 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 RCAN1P53805 252 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 ADKP55263 362 aaKnown RBP4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 GOLGA8FQ08AF8 430 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 GOLGA8DPQ0D2H9 430 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 HSPA14Q0VDF9 509 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 TCIRG1Q13488 830 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 BOLA3Q53S33 107 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 TTC39BQ5VTQ0 682 aaPredicted RBP4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 IRGCQ6NXR0 463 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 PDXDC2PQ6P474 469 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 PNMA8AQ86V59 439 aaPredicted RBP4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 CCDC13Q8IYE1 715 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 RETREG2Q8NC44 543 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 KCNG4Q8TDN1 519 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 ZC3H15Q8WU90 426 aaKnown RBP4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 STAMBPL1Q96FJ0 436 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 CALML4Q96GE6 196 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 ALPK1Q96QP1 1244 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 BEGAINQ9BUH8 593 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 CABP5Q9NP86 173 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 TCF7L2Q9NQB0 619 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 BATF3Q9NR55 127 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 XPO7Q9UIA9 1087 aaKnown RBP4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 TMED5Q9Y3A6 229 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 A0A1B0GUL6 1792 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 IGSF1Q8N6C5 1336 aa4.01□□□□□ -1.77
PCDH11X-208ENST00000504220 A0A0J9YVX5 310 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 GCOM1H8Y6P7 765 aaPredicted RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 ZBTB7BO15156 539 aaPredicted RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 BAIAP3O94812 1187 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 NPTXRO95502 500 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 LDHCP07864 332 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 MYZAPP0CAP1 466 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 RFC4P35249 363 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 CYLC1P35663 651 aaPredicted RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 AP3M2P53677 418 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 NLRP12P59046 1061 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 TTLL12Q14166 644 aaPredicted RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 RTN1Q16799 776 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 ZNF827Q17R98 1081 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 MCMDC2Q4G0Z9 681 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 BEND3Q5T5X7 828 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 SPECC1LQ69YQ0 1117 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 ZNF790Q6PG37 636 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 CCDC121Q6ZUS5 278 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 MARCH10Q8NA82 808 aaPredicted RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 PPP1R14CQ8TAE6 165 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 NPLOC4Q8TAT6 608 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 GDAP1Q8TB36 358 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 PIGBQ92521 554 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 PHKBQ93100 1093 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 PDE11AQ9HCR9 933 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 EXOC1Q9NV70 894 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 PALD1Q9ULE6 856 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 PCDHGA8Q9Y5G5 932 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 SLC4A4Q9Y6R1 1079 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 PTPRFP10586 1907 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 GOLGA6L9A6NEM1 432 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 TRIM75PA6NK02 468 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 GRM8O00222 908 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 B3GALNT1O75752 331 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 SNRPA1P09661 255 aaKnown RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 GNAT2P19087 354 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 SP4Q02446 784 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 TFCP2Q12800 502 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 XRCC4Q13426 336 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 MTX1Q13505 466 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 NKX1-1Q15270 411 aaPredicted RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 TMEM266Q2M3C6 531 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 PCNX4Q63HM2 1172 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 RBM43Q6ZSC3 357 aaKnown RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 TTC39CQ8N584 583 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 GSDMBQ8TAX9 411 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 PTCD2Q8WV60 388 aaKnown RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 ZFPM2Q8WW38 1151 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 HOOK2Q96ED9 719 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 HNRNPABQ99729 332 aaKnown RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 YIPF3Q9GZM5 350 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 GOLPH3LQ9H4A5 285 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 KAT14Q9H8E8 782 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 SLC52A2Q9HAB3 445 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 KMT5AQ9NQR1 393 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 PAG1Q9NWQ8 432 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 LUC7L2Q9Y383 392 aaKnown RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 FAM32AQ9Y421 112 aaKnown RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 C2CD2Q9Y426 696 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 ARFGEF2Q9Y6D5 1785 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 MAP3K5Q99683 1374 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 PSDA5PKW4 1024 aaPredicted RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 B4E1Z4 1266 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 TTI1O43156 1089 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 VIMP08670 466 aaKnown RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 RPSAP08865 295 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms