RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 NLRC5Q86WI3 1866 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 MINDY4BA8MYZ0 360 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 KIF28PB7ZC32 967 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 F5H6K3 240 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 NFIBO00712 420 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 ZBED4O75132 1171 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 IQCF3P0C7M6 154 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 ZNF286BP0CG31 522 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 RASA1P20936 1047 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 MSX1P28360 303 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 GTF2F1P35269 517 aaKnown RBP eCLIP4.33□□□□□ -1.72
USP46-205ENST00000504078 VCPP55072 806 aaKnown RBP4.33□□□□□ -1.72
USP46-205ENST00000504078 PURAQ00577 322 aaKnown RBP4.33□□□□□ -1.72
USP46-205ENST00000504078 CENPCQ03188 943 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 KLRC3Q07444 240 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 TMEM132AQ24JP5 1023 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 CCDC96Q2M329 555 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 LEXMQ3ZCV2 418 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 C12orf60Q5U649 245 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 TSHZ3Q63HK5 1081 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 TAPT1Q6NXT6 567 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.33□□□□□ -1.72
USP46-205ENST00000504078 KCTD1Q719H9 257 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 MYOCDQ8IZQ8 938 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 MSL3Q8N5Y2 521 aaKnown RBP4.33□□□□□ -1.72
USP46-205ENST00000504078 DHX38Q92620 1227 aaKnown RBP4.33□□□□□ -1.72
USP46-205ENST00000504078 WNT8BQ93098 351 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 CEP95Q96GE4 821 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 TGS1Q96RS0 853 aaKnown RBP4.33□□□□□ -1.72
USP46-205ENST00000504078 CRISPLD1Q9H336 500 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 BOLA2Q9H3K6 86 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 SLC38A10Q9HBR0 1119 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 EPB41L4AQ9HCS5 686 aaPredicted RBP4.33□□□□□ -1.72
USP46-205ENST00000504078 GPR108Q9NPR9 543 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 CLIP2Q9UDT6 1046 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 HDAC5Q9UQL6 1122 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 PCDHGC4Q9Y5F7 938 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 TRANK1O15050 2925 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 SCN10AQ9Y5Y9 1956 aa4.33□□□□□ -1.72
USP46-205ENST00000504078 FRMPD2Q68DX3 1309 aaPredicted RBP4.32□□□□□ -1.72
USP46-205ENST00000504078 PTPDC1A2A3K4 754 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 C9orf172C9J069 976 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 TMEM232C9JQI7 657 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 LINC01565O15544 149 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 TRAK2O60296 914 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 ZEB2O60315 1214 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 NBNO60934 754 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 TBX10O75333 385 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 CABYRO75952 493 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 ARIH2O95376 493 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 PDGFBP01127 241 aaPredicted RBP4.32□□□□□ -1.72
USP46-205ENST00000504078 PFKMP08237 780 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 CTSHP09668 335 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 FBXO45P0C2W1 286 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 RLBP1P12271 317 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 ALADP13716 330 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 POU3F3P20264 500 aaPredicted RBP4.32□□□□□ -1.72
USP46-205ENST00000504078 IBSPP21815 317 aaPredicted RBP4.32□□□□□ -1.72
USP46-205ENST00000504078 CALML3P27482 149 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 ADD2P35612 726 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 SCTRP47872 440 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 ALDH5A1P51649 535 aaPredicted RBP4.32□□□□□ -1.72
USP46-205ENST00000504078 DLX2Q07687 328 aaPredicted RBP4.32□□□□□ -1.72
USP46-205ENST00000504078 TCF15Q12870 199 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 GPNMBQ14956 572 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 PPP2R5BQ15173 497 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 PTGISQ16647 500 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 SLFN13Q68D06 897 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 GDF6Q6KF10 455 aaPredicted RBP4.32□□□□□ -1.72
USP46-205ENST00000504078 CTR9Q6PD62 1173 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 LRRC8DQ7L1W4 858 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 CHST3Q7LGC8 479 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 FCHSD1Q86WN1 690 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 CERS3Q8IU89 383 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 AMOTL1Q8IY63 956 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 RETREG2Q8NC44 543 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 SSH3Q8TE77 659 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 ZNF512BQ96KM6 892 aaPredicted RBP4.32□□□□□ -1.72
USP46-205ENST00000504078 CCDC17Q96LX7 622 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 CTAGE1Q96RT6 745 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 MTG1Q9BT17 334 aaPredicted RBP4.32□□□□□ -1.72
USP46-205ENST00000504078 ALG1Q9BT22 464 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 WDR11Q9BZH6 1224 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 PUS7LQ9H0K6 701 aaKnown RBP4.32□□□□□ -1.72
USP46-205ENST00000504078 OSBPL3Q9H4L5 887 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 KANSL2Q9H9L4 492 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 MKNK2Q9HBH9 465 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 PAG1Q9NWQ8 432 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 KLF15Q9UIH9 416 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 CCPG1Q9ULG6 757 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 PCDHGC5Q9Y5F6 944 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 MICAL3Q7RTP6 2002 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 KIAA1671Q9BY89 1806 aa4.32□□□□□ -1.72
USP46-205ENST00000504078 BDP1A6H8Y1 2624 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 C5orf42Q9H799 3197 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 ZBED9Q6R2W3 1325 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 TMEM221A6NGB7 291 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 ASB14A6NK59 587 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 M0R296 226 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 M0R2C6 588 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms