RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 LAMA4Q16363 1823 aa18.33■□□□□ 0.52
PDLIM7-210ENST00000503827 MYO10Q9HD67 2058 aa18.32■□□□□ 0.52
PDLIM7-210ENST00000503827 A0A0D9SFI3 127 aa18.32■□□□□ 0.52
PDLIM7-210ENST00000503827 PPFIA3O75145 1194 aa18.32■□□□□ 0.52
PDLIM7-210ENST00000503827 STAM2O75886 525 aa18.32■□□□□ 0.52
PDLIM7-210ENST00000503827 UBE3AQ05086 875 aa18.32■□□□□ 0.52
PDLIM7-210ENST00000503827 C20orf194Q5TEA3 1177 aa18.32■□□□□ 0.52
PDLIM7-210ENST00000503827 NKD2Q969F2 451 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-210ENST00000503827 ZSCAN10Q96SZ4 725 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-210ENST00000503827 CDY2AQ9Y6F7 541 aa18.32■□□□□ 0.52
PDLIM7-210ENST00000503827 CACNA1AO00555 2505 aa18.32■□□□□ 0.52
PDLIM7-210ENST00000503827 RIF1Q5UIP0 2472 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 SPATA31C2B4DYI2 1134 aa18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 ZNF213O14771 459 aa18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 ZBTB5O15062 677 aa18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 FIBPO43427 364 aa18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 PPP1R11O60927 126 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 CD52P31358 61 aa18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 RBM10P98175 930 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 TRAF1Q13077 416 aa18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 DUSP6Q16828 381 aa18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 UBALD2Q8IYN6 164 aa18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 CRIPAKQ8N1N5 446 aa18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 DNAJB3Q8WWF6 145 aa18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 LINC01599Q8WXQ3 324 aa18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 INPP4AQ96PE3 977 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 PCDHB12Q9Y5F1 795 aa18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 FNDC1Q4ZHG4 1894 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-210ENST00000503827 MRPS9P82933 396 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 SP4Q02446 784 aa18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 PPFIA1Q13136 1202 aa18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 MTMR3Q13615 1198 aa18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 SPOUT1Q5T280 376 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 MCTP2Q6DN12 878 aa18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 RTN4RL1Q86UN2 441 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 ZNF589Q86UQ0 364 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 ENAHQ8N8S7 591 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 KREMEN2Q8NCW0 462 aa18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 AGO3Q9H9G7 860 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 AAASQ9NRG9 546 aa18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 TUBE1Q9UJT0 475 aa18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 LRFN2Q9ULH4 789 aa18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 NR2E1Q9Y466 385 aa18.3■□□□□ 0.52
PDLIM7-210ENST00000503827 KLRF2D3W0D1 207 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 RPLP2P05387 115 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 SCG2P13521 617 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 SP100P23497 879 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 MRPS6P82932 125 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 SEMA3FQ13275 785 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 IER5Q5VY09 327 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 PDE12Q6L8Q7 609 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 TICAM2Q86XR7 235 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 ADSSL1Q8N142 457 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 STAG2Q8N3U4 1231 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 TMEM105Q8N8V8 129 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 VN1R2Q8NFZ6 395 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 MTMR8Q96EF0 704 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 S1PR5Q9H228 398 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 RTEL1Q9NZ71 1219 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 SORCS3Q9UPU3 1222 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 SQORQ9Y6N5 450 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 MYO15AQ9UKN7 3530 aa18.29■□□□□ 0.52
PDLIM7-210ENST00000503827 SALL3Q9BXA9 1300 aa18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 B4E1Z4 1266 aa18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 TECP42680 631 aa18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 NMIQ13287 307 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 GRIK4Q16099 956 aa18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 ANKRD54Q6NXT1 300 aa18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 TMEM184AQ6ZMB5 413 aa18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 FRMD5Q7Z6J6 570 aa18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 SENP7Q9BQF6 1050 aa18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 ZBTB47Q9UFB7 747 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 RCAN3Q9UKA8 241 aa18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 TELO2Q9Y4R8 837 aa18.28■□□□□ 0.52
PDLIM7-210ENST00000503827 MBLAC1A4D2B0 266 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-210ENST00000503827 M0QZ92 97 aa18.27■□□□□ 0.52
PDLIM7-210ENST00000503827 TCF7P36402 384 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-210ENST00000503827 HOMER1Q86YM7 354 aa18.27■□□□□ 0.52
PDLIM7-210ENST00000503827 GIMAP8Q8ND71 665 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-210ENST00000503827 APOL5Q9BWW9 433 aa18.27■□□□□ 0.52
PDLIM7-210ENST00000503827 TSHZ2Q9NRE2 1034 aa18.27■□□□□ 0.52
PDLIM7-210ENST00000503827 ERAP1Q9NZ08 941 aa18.27■□□□□ 0.52
PDLIM7-210ENST00000503827 ZSWIM5Q9P217 1185 aa18.27■□□□□ 0.52
PDLIM7-210ENST00000503827 FRMPD4Q14CM0 1322 aa18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 BAZ2BQ9UIF8 2168 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 FGF18O76093 207 aa18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 BRD1O95696 1058 aa18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 GATMP50440 423 aa18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 ERVFC1P60507 584 aa18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 PAK2Q13177 524 aa18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 ASTLQ6HA08 431 aaPredicted RBP18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 THNSL1Q8IYQ7 743 aa18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 UBAC1Q9BSL1 405 aa18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 TMEM260Q9NX78 707 aa18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 PADI3Q9ULW8 664 aa18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 TRPV2Q9Y5S1 764 aa18.26■□□□□ 0.51
PDLIM7-210ENST00000503827 HOXB8P17481 243 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-210ENST00000503827 IBSPP21815 317 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-210ENST00000503827 MARK3P27448 753 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms