RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ORC4O43929 436 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 ORC2Q13416 577 aaPredicted RBP17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 SGMS1Q86VZ5 419 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 KMT5AQ9NQR1 393 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 ZDHHC9Q9Y397 364 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 PLA2G4BP0C869 781 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 EN1Q05925 392 aaPredicted RBP17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 SLMAPQ14BN4 828 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 SGO2Q562F6 1265 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 RINT1Q6NUQ1 792 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 CEP170P1Q96L14 293 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 GPSM2P81274 684 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 RNASELQ05823 741 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 ALCAMQ13740 583 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 MMS19Q96T76 1030 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 ZNF341Q9BYN7 854 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 GOLPH3LQ9H4A5 285 aa17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.5■□□□□ 0.39
HMGXB3-202ENST00000503427 CLIC2O15247 247 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 GFPT2O94808 682 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 PARVGQ9HBI0 331 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 ANKFY1Q9P2R3 1169 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 PREX1Q8TCU6 1659 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 CEMIPQ8WUJ3 1361 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 POC1B-GALNT4F8VUJ3 575 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 CSF1RP07333 972 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 EIF3BP55884 814 aaKnown RBP17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 PALM3A6NDB9 673 aaPredicted RBP17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 XPOTO43592 962 aaKnown RBP17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 LUC7L3O95232 432 aaKnown RBP17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 GRM4Q14833 912 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 SH2D4BQ5SQS7 431 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 ARHGEF18Q6ZSZ5 1173 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 BARGINQ6ZT62 677 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 CDKL2Q92772 493 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 PCDHB4Q9Y5E5 795 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 CTNND1O60716 968 aaKnown RBP17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 SH3BGRP55822 239 aaPredicted RBP17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 ZNF512BQ96KM6 892 aaPredicted RBP17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 TDRD3Q9H7E2 651 aaKnown RBP17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 USP17L5A8MUK1 530 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 INHBAP08476 426 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 ARHGAP4P98171 946 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 CRAMP1Q96RY5 1269 aa17.49■□□□□ 0.39
HMGXB3-202ENST00000503427 LRRN2O75325 713 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 YWHAGP61981 247 aaKnown RBP eCLIP17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 CUL1Q13616 776 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 CFAP61Q8NHU2 1237 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 PSAPP07602 524 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 GLE1Q53GS7 698 aaKnown RBP17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 CEP120Q8N960 986 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 GJB4Q9NTQ9 266 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 H7C0C1 242 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 ZWINTO95229 277 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 NR1D1P20393 614 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 ATP5OP48047 213 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 TRIM68Q6AZZ1 485 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 NEK9Q8TD19 979 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 LGALS16A8MUM7 142 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 CAPN9O14815 690 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 CAMTA2O94983 1202 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 CACNB3P54284 484 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 GABPAQ06546 454 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 SCARF1Q14162 830 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 TERF2Q15554 542 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 TOGARAM2Q6ZUX3 1019 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 NACA2Q9H009 215 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 EFCC1Q9HA90 598 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 AFG3L2Q9Y4W6 797 aa17.48■□□□□ 0.39
HMGXB3-202ENST00000503427 VGLL3A8MV65 326 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 HMGB1P1B2RPK0 211 aaPredicted RBP17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 RCSD1Q6JBY9 416 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 MRPL47Q9HD33 250 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 ABHD10Q9NUJ1 306 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 GDAQ9Y2T3 454 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 GARSP41250 739 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 IGBP1P78318 339 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 PPP2R5CQ13362 524 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 CUL4BQ13620 913 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 CEP95Q96GE4 821 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 ANAPC5Q9UJX4 755 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 ANO9A1A5B4 782 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 SGK1O00141 431 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 CNGA1P29973 690 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 RPS6KA2Q15349 733 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 CCHCR1Q8TD31 782 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 CCDC188H7C350 402 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 MEIS1O00470 390 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 ARHGEF6Q15052 776 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 ALKBH5Q6P6C2 394 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 UNC13DQ70J99 1090 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 FEM1BQ9UK73 627 aa17.47■□□□□ 0.39
HMGXB3-202ENST00000503427 BAG2O95816 211 aa17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 TRIM42Q8IWZ5 723 aa17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 NEDD1Q8NHV4 660 aa17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 FMO2Q99518 471 aa17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 DIP2BQ9P265 1576 aa17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 MAD1L1Q9Y6D9 718 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms