RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.58□□□□□ -1.04
NEDD4-203ENST00000502612 TRHDEQ9UKU6 1024 aa8.58□□□□□ -1.04
NEDD4-203ENST00000502612 G3BP2Q9UN86 482 aaKnown RBP8.58□□□□□ -1.04
NEDD4-203ENST00000502612 NUB1Q9Y5A7 615 aa8.58□□□□□ -1.04
NEDD4-203ENST00000502612 BIN1O00499 593 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 LRG1P02750 347 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 FAHP16930 419 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 GJA4P35212 333 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 SLC9A5Q14940 896 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 TERF2Q15554 542 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 MPZL3Q6UWV2 235 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 MIB1Q86YT6 1006 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 FAM126BQ8IXS8 530 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 CMIPQ8IY22 773 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 TTLL11Q8NHH1 800 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 DIRC2Q96SL1 478 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 SYT3Q9BQG1 590 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 ZNF552Q9H707 407 aaPredicted RBP8.57□□□□□ -1.04
NEDD4-203ENST00000502612 DTLQ9NZJ0 730 aa8.57□□□□□ -1.04
NEDD4-203ENST00000502612 THRAP3Q9Y2W1 955 aaKnown RBP8.57□□□□□ -1.04
NEDD4-203ENST00000502612 FOXP2O15409 715 aa8.56□□□□□ -1.04
NEDD4-203ENST00000502612 S100BP04271 92 aaPredicted RBP8.56□□□□□ -1.04
NEDD4-203ENST00000502612 FBLN1P23142 703 aa8.56□□□□□ -1.04
NEDD4-203ENST00000502612 MC3RP41968 323 aa8.56□□□□□ -1.04
NEDD4-203ENST00000502612 NCKAP1LP55160 1127 aa8.56□□□□□ -1.04
NEDD4-203ENST00000502612 PRR23BQ6ZRT6 265 aa8.56□□□□□ -1.04
NEDD4-203ENST00000502612 RTF1Q92541 710 aaKnown RBP8.56□□□□□ -1.04
NEDD4-203ENST00000502612 ERCC4Q92889 916 aaPredicted RBP8.56□□□□□ -1.04
NEDD4-203ENST00000502612 PUS7LQ9H0K6 701 aaKnown RBP8.56□□□□□ -1.04
NEDD4-203ENST00000502612 WASF3Q9UPY6 502 aa8.56□□□□□ -1.04
NEDD4-203ENST00000502612 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.55□□□□□ -1.04
NEDD4-203ENST00000502612 ULK1O75385 1050 aa8.55□□□□□ -1.04
NEDD4-203ENST00000502612 ASGR2P07307 311 aa8.55□□□□□ -1.04
NEDD4-203ENST00000502612 SDHAP31040 664 aa8.55□□□□□ -1.04
NEDD4-203ENST00000502612 MC4RP32245 332 aa8.55□□□□□ -1.04
NEDD4-203ENST00000502612 CR1LQ2VPA4 569 aa8.55□□□□□ -1.04
NEDD4-203ENST00000502612 ODR4Q5SWX8 454 aa8.55□□□□□ -1.04
NEDD4-203ENST00000502612 AMIGO3Q86WK7 504 aa8.55□□□□□ -1.04
NEDD4-203ENST00000502612 ASB15Q8WXK1 588 aa8.55□□□□□ -1.04
NEDD4-203ENST00000502612 YIPF4Q9BSR8 244 aa8.55□□□□□ -1.04
NEDD4-203ENST00000502612 PDGFDQ9GZP0 370 aaPredicted RBP8.55□□□□□ -1.04
NEDD4-203ENST00000502612 NSUN3Q9H649 340 aaKnown RBP8.55□□□□□ -1.04
NEDD4-203ENST00000502612 ACSS2Q9NR19 701 aa8.55□□□□□ -1.04
NEDD4-203ENST00000502612 TOPORSQ9NS56 1045 aaPredicted RBP8.55□□□□□ -1.04
NEDD4-203ENST00000502612 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.55□□□□□ -1.04
NEDD4-203ENST00000502612 MYOCOSA0A1B0GUC4 107 aa8.54□□□□□ -1.04
NEDD4-203ENST00000502612 GABRDO14764 452 aa8.54□□□□□ -1.04
NEDD4-203ENST00000502612 ERVK-21P61565 698 aa8.54□□□□□ -1.04
NEDD4-203ENST00000502612 SRSF3P84103 164 aaKnown RBP8.54□□□□□ -1.04
NEDD4-203ENST00000502612 TMEM62Q0P6H9 643 aa8.54□□□□□ -1.04
NEDD4-203ENST00000502612 ABCB5Q2M3G0 1257 aa8.54□□□□□ -1.04
NEDD4-203ENST00000502612 TEPPQ6URK8 271 aa8.54□□□□□ -1.04
NEDD4-203ENST00000502612 ETV3LQ6ZN32 361 aa8.54□□□□□ -1.04
NEDD4-203ENST00000502612 PROSER1Q86XN7 944 aa8.54□□□□□ -1.04
NEDD4-203ENST00000502612 PASD1Q8IV76 773 aa8.54□□□□□ -1.04
NEDD4-203ENST00000502612 TOE1Q96GM8 510 aaKnown RBP8.54□□□□□ -1.04
NEDD4-203ENST00000502612 C16orf92Q96LL3 132 aa8.54□□□□□ -1.04
NEDD4-203ENST00000502612 SEMA4AQ9H3S1 761 aa8.54□□□□□ -1.04
NEDD4-203ENST00000502612 ABLIM1O14639 778 aa8.53□□□□□ -1.04
NEDD4-203ENST00000502612 C8BP07358 591 aa8.53□□□□□ -1.04
NEDD4-203ENST00000502612 IARSP41252 1262 aaKnown RBP8.53□□□□□ -1.04
NEDD4-203ENST00000502612 SESN3P58005 492 aa8.53□□□□□ -1.04
NEDD4-203ENST00000502612 PHC1P78364 1004 aa8.53□□□□□ -1.04
NEDD4-203ENST00000502612 SYDE2Q5VT97 1194 aa8.53□□□□□ -1.04
NEDD4-203ENST00000502612 CD276Q5ZPR3 534 aa8.53□□□□□ -1.04
NEDD4-203ENST00000502612 CBARPQ8N350 705 aaPredicted RBP8.53□□□□□ -1.04
NEDD4-203ENST00000502612 JDP2Q8WYK2 163 aa8.53□□□□□ -1.04
NEDD4-203ENST00000502612 GBP4Q96PP9 640 aa8.53□□□□□ -1.04
NEDD4-203ENST00000502612 CEP89Q96ST8 783 aa8.53□□□□□ -1.04
NEDD4-203ENST00000502612 SLC39A2Q9NP94 309 aa8.53□□□□□ -1.04
NEDD4-203ENST00000502612 C14orf119Q9NWQ9 140 aa8.53□□□□□ -1.04
NEDD4-203ENST00000502612 BTBD7Q9P203 1132 aa8.53□□□□□ -1.04
NEDD4-203ENST00000502612 ALDH1L1O75891 902 aa8.52□□□□□ -1.05
NEDD4-203ENST00000502612 CYP17A1P05093 508 aa8.52□□□□□ -1.05
NEDD4-203ENST00000502612 AOAHP28039 575 aa8.52□□□□□ -1.05
NEDD4-203ENST00000502612 LSP1P33241 339 aa8.52□□□□□ -1.05
NEDD4-203ENST00000502612 CDR1P51861 262 aa8.52□□□□□ -1.05
NEDD4-203ENST00000502612 DBPQ10586 325 aaPredicted RBP8.52□□□□□ -1.05
NEDD4-203ENST00000502612 PDCD1Q15116 288 aa8.52□□□□□ -1.05
NEDD4-203ENST00000502612 TMC5Q6UXY8 1006 aa8.52□□□□□ -1.05
NEDD4-203ENST00000502612 LIPIQ6XZB0 460 aa8.52□□□□□ -1.05
NEDD4-203ENST00000502612 RTN4RL1Q86UN2 441 aaPredicted RBP8.52□□□□□ -1.05
NEDD4-203ENST00000502612 ZNF610Q8N9Z0 462 aa8.52□□□□□ -1.05
NEDD4-203ENST00000502612 FOXRED1Q96CU9 486 aaPredicted RBP8.52□□□□□ -1.05
NEDD4-203ENST00000502612 AHCYL2Q96HN2 611 aaKnown RBP8.52□□□□□ -1.05
NEDD4-203ENST00000502612 SGPP1Q9BX95 441 aa8.52□□□□□ -1.05
NEDD4-203ENST00000502612 MCOLN1Q9GZU1 580 aa8.52□□□□□ -1.05
NEDD4-203ENST00000502612 CNTD2Q9H8S5 307 aa8.52□□□□□ -1.05
NEDD4-203ENST00000502612 PRAMEF22A3QJZ6 481 aa8.51□□□□□ -1.05
NEDD4-203ENST00000502612 KDM1AO60341 852 aa8.51□□□□□ -1.05
NEDD4-203ENST00000502612 MT-CO1P00395 513 aa8.51□□□□□ -1.05
NEDD4-203ENST00000502612 ATF2P15336 505 aa8.51□□□□□ -1.05
NEDD4-203ENST00000502612 FNTBP49356 437 aa8.51□□□□□ -1.05
NEDD4-203ENST00000502612 IRAK1P51617 712 aa8.51□□□□□ -1.05
NEDD4-203ENST00000502612 TTF1Q15361 905 aaPredicted RBP8.51□□□□□ -1.05
NEDD4-203ENST00000502612 PHF19Q5T6S3 580 aa8.51□□□□□ -1.05
NEDD4-203ENST00000502612 PRAMEF18Q5VWM3 479 aa8.51□□□□□ -1.05
NEDD4-203ENST00000502612 CD300LDQ6UXZ3 194 aa8.51□□□□□ -1.05
NEDD4-203ENST00000502612 RASSF3Q86WH2 238 aa8.51□□□□□ -1.05
NEDD4-203ENST00000502612 CILP2Q8IUL8 1156 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms