RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 NLRX1Q86UT6 975 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 SMARCC2Q8TAQ2 1214 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 RRP36Q96EU6 259 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 SAMD11Q96NU1 681 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 C16orf70Q9BSU1 422 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 SEC63Q9UGP8 760 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 TET1Q8NFU7 2136 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 BDP1A6H8Y1 2624 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 LCHNA4D1U4 455 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 LINC01553A4QN01 128 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 SPATA31C2B4DYI2 1134 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 E7EWF7 191 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 ARHGEF15O94989 841 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 LGALS2P05162 132 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 SMIM10L2AP0DMW4 78 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 SMIM10L2BP0DMW5 78 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 CHMLP26374 656 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 KRT40Q6A162 431 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 FAM117BQ6P1L5 589 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 CASC1Q6TDU7 716 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 MYOCDQ8IZQ8 938 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 DBF4BQ8NFT6 615 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 IL31RAQ8NI17 732 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 RNF166Q96A37 237 aaPredicted RBP12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 CDHR1Q96JP9 859 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 INPP4AQ96PE3 977 aaPredicted RBP12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 SENP7Q9BQF6 1050 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 MTA3Q9BTC8 594 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 SUGCTQ9HAC7 445 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 MTUS1Q9ULD2 1270 aa12.82□□□□□ -0.36
UBE2D3-211ENST00000502404 HOXA2O43364 376 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 CYTH3O43739 400 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 LPXNO60711 386 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 DDAH1O94760 285 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 FUT2Q10981 343 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 PLEKHG4Q58EX7 1191 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 TRAF7Q6Q0C0 670 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 CYFIP1Q7L576 1253 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 TMCO2Q7Z6W1 182 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 GDPD5Q8WTR4 605 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 APBB2Q92870 758 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 NECAB3Q96P71 396 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 YME1L1Q96TA2 773 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 SPZ1Q9BXG8 430 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 RNPEPQ9H4A4 650 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 RTEL1Q9NZ71 1219 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 SPTBN5Q9NRC6 3674 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 TRANK1O15050 2925 aa12.81□□□□□ -0.36
UBE2D3-211ENST00000502404 PIK3CDO00329 1044 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 TREHO43280 583 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 CALM1P0DP23 149 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 CALM2P0DP24 149 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 CALM3P0DP25 149 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 GSPT1P15170 499 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 HOXC8P31273 242 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 MRPS9P82933 396 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 PTH1RQ03431 593 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 MBTPS1Q14703 1052 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 PCNX4Q63HM2 1172 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.8□□□□□ -0.364e-6■■■□□ 19.2
UBE2D3-211ENST00000502404 NFXL1Q6ZNB6 911 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 RSPH3Q86UC2 560 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 IGDCC4Q8TDY8 1250 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 PIBF1Q8WXW3 757 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 MAP4K1Q92918 833 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 TNPO1Q92973 898 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 WNT8BQ93098 351 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 GPR20Q99678 358 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 IL25Q9H293 177 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 FRMPD4Q14CM0 1322 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 NRCAMQ92823 1304 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 MYH7BA7E2Y1 1941 aa12.8□□□□□ -0.36
UBE2D3-211ENST00000502404 CCDC69A6NI79 296 aa12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 SGSM2O43147 1006 aa12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 RPLP2P05387 115 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 MCM5P33992 734 aa12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 HTRA4P83105 476 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 ARHGAP4P98171 946 aa12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 PUS10Q3MIT2 529 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 UTP14CQ5TAP6 766 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 TAF2Q6P1X5 1199 aa12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 ZNF654Q8IZM8 581 aa12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 GPKOWQ92917 476 aaPredicted RBP eCLIP12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 TOP1MTQ969P6 601 aa12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 TMEM87BQ96K49 555 aa12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 EHMT1Q9H9B1 1298 aa12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 SETD4Q9NVD3 440 aa12.79□□□□□ -0.36
UBE2D3-211ENST00000502404 TCF20Q9UGU0 1960 aaKnown RBP12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 SPTLC1O15269 473 aa12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 MAFGO15525 162 aa12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 SLC35G1Q2M3R5 365 aa12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 TCTN1Q2MV58 587 aa12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 TUSC1Q2TAM9 212 aa12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 TIGD5Q53EQ6 642 aa12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 SEPT1Q8WYJ6 367 aa12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 GPRASP2Q96D09 838 aa12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 MRPL38Q96DV4 380 aaKnown RBP12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 FAM122AQ96E09 287 aa12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 IFIH1Q9BYX4 1025 aaKnown RBP12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 UBE2ZQ9H832 354 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms