RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 TCP1P17987 556 aaKnown RBP10.86□□□□□ -0.67
CLIP1-204ENST00000501271 AARSP49588 968 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLIP1-204ENST00000501271 FKBP1AP62942 108 aaKnown RBP10.86□□□□□ -0.67
CLIP1-204ENST00000501271 MRPS25P82663 173 aaKnown RBP10.86□□□□□ -0.67
CLIP1-204ENST00000501271 ITIH3Q06033 890 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 KCNH2Q12809 1159 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 RAPGEF1Q13905 1077 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 RRP1BQ14684 758 aaKnown RBP10.86□□□□□ -0.67
CLIP1-204ENST00000501271 HSP90B2PQ58FF3 399 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 CCNI2Q6ZMN8 369 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-204ENST00000501271 FAM133AQ8N9E0 248 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 SYT2Q8N9I0 419 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-204ENST00000501271 CYP2W1Q8TAV3 490 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 NOX5Q96PH1 765 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 LRRC1Q9BTT6 524 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 SELENOOQ9BVL4 669 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 ACBD3Q9H3P7 528 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 BCAS3Q9H6U6 928 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 MED4Q9NPJ6 270 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 CALCOCO1Q9P1Z2 691 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 ZNF219Q9P2Y4 722 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-204ENST00000501271 VAV3Q9UKW4 847 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 FAM184BQ9ULE4 1060 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 RSPH10B2B2RC85 870 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 CETN3O15182 167 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 GH2P01242 217 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 RSPH10BP0C881 870 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 MYBP10242 640 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 MMP14P50281 582 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 HDLBPQ00341 1268 aaKnown RBP10.85□□□□□ -0.67
CLIP1-204ENST00000501271 CYP4A11Q02928 519 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 ARID5AQ03989 594 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 EPM2AIP1Q7L775 607 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-204ENST00000501271 ERMNQ8TAM6 284 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 TBC1D5Q92609 795 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 TDRD3Q9H7E2 651 aaKnown RBP10.85□□□□□ -0.67
CLIP1-204ENST00000501271 DMGDHQ9UI17 866 aaKnown RBP10.85□□□□□ -0.67
CLIP1-204ENST00000501271 HDAC9Q9UKV0 1011 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 DNM3Q9UQ16 869 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 A0A087X0T9 212 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 A0A1W2PRG0 241 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 FAM228BP0C875 321 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 ACTN1P12814 892 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 EPS15P42566 896 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 MATR3P43243 847 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLIP1-204ENST00000501271 NAP1L1P55209 391 aaKnown RBP10.85□□□□□ -0.67
CLIP1-204ENST00000501271 ENOX2Q16206 610 aaKnown RBP10.85□□□□□ -0.67
CLIP1-204ENST00000501271 DPY19L2P1Q6NXN4 242 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 SPICE1Q8N0Z3 855 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 RNF10Q8N5U6 811 aaKnown RBP10.85□□□□□ -0.67
CLIP1-204ENST00000501271 AENQ8WTP8 325 aaKnown RBP10.85□□□□□ -0.67
CLIP1-204ENST00000501271 PACSIN1Q9BY11 444 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 POLD4Q9HCU8 107 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 SERPINA10Q9UK55 444 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 TRAF3IP3Q9Y228 551 aa10.85□□□□□ -0.67
CLIP1-204ENST00000501271 ATRNL1Q5VV63 1379 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 EML1O00423 815 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 RNF40O75150 1001 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 PRPF6O94906 941 aaKnown RBP10.84□□□□□ -0.67
CLIP1-204ENST00000501271 BMP3P12645 472 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 KLRC1P26715 233 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 CIITAP33076 1130 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 SLC7A5Q01650 507 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 SLC18A3Q16572 532 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 KNOP1Q1ED39 458 aaKnown RBP10.84□□□□□ -0.67
CLIP1-204ENST00000501271 SLC30A10Q6XR72 485 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 RIN2Q8WYP3 895 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-204ENST00000501271 MS4A14Q96JA4 679 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 FAM20AQ96MK3 541 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 RUSC1Q9BVN2 902 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 BHMT2Q9H2M3 363 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 AIPL1Q9NZN9 384 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 ASTN1O14525 1302 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 PALMO75781 387 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 FOSP01100 380 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-204ENST00000501271 SLC9A1P19634 815 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 KLHL30Q0D2K2 578 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 ASIC2Q16515 512 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 AOC3Q16853 763 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 CCDC181Q5TID7 509 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 MCTP2Q6DN12 878 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 BTNL9Q6UXG8 535 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLIP1-204ENST00000501271 FAM204AQ9H8W3 233 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 RBM12Q9NTZ6 932 aaKnown RBP10.84□□□□□ -0.67
CLIP1-204ENST00000501271 ADAMTS1Q9UHI8 967 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 PRR12Q9ULL5 1215 aa10.84□□□□□ -0.67
CLIP1-204ENST00000501271 AGPSO00116 658 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 AKAP3O75969 853 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 FTCDO95954 541 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 POLD1P28340 1107 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 KCNA1Q09470 495 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 NAB2Q15742 525 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 ZSCAN26Q16670 478 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 CCDC70Q6NSX1 233 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-204ENST00000501271 FRMD5Q7Z6J6 570 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 EIF2AK1Q9BQI3 630 aaKnown RBP10.83□□□□□ -0.68
CLIP1-204ENST00000501271 RGL1Q9NZL6 768 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 ARMCX3Q9UH62 379 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms