RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 ITGB8P26012 769 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 SFNP31947 248 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 MAGEA10P43363 369 aaPredicted RBP18.91■□□□□ 0.62
PRKCB-210ENST00000498739 TRAPPC10P48553 1259 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 ZNF200P98182 395 aaPredicted RBP18.91■□□□□ 0.62
PRKCB-210ENST00000498739 HIC1Q14526 733 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 ZNF174Q15697 407 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 TTC38Q5R3I4 469 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 PDXDC2PQ6P474 469 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 SLFN12Q8IYM2 578 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 AFAP1L1Q8TED9 768 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 BADQ92934 168 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 HIPK3Q9H422 1215 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 SETD4Q9NVD3 440 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 GABBR1Q9UBS5 961 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 TRPC6Q9Y210 931 aa18.91■□□□□ 0.62
PRKCB-210ENST00000498739 TIMP1P01033 207 aa18.9■□□□□ 0.62
PRKCB-210ENST00000498739 PPFIA1Q13136 1202 aa18.9■□□□□ 0.62
PRKCB-210ENST00000498739 NBR1Q14596 966 aa18.9■□□□□ 0.62
PRKCB-210ENST00000498739 PLCB4Q15147 1175 aa18.9■□□□□ 0.62
PRKCB-210ENST00000498739 B3GNT9Q6UX72 402 aa18.9■□□□□ 0.62
PRKCB-210ENST00000498739 CHRDL2Q6WN34 429 aa18.9■□□□□ 0.62
PRKCB-210ENST00000498739 VAV3Q9UKW4 847 aa18.9■□□□□ 0.62
PRKCB-210ENST00000498739 LTBP2Q14767 1821 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 DNAH12Q6ZR08 3092 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 GNAT1P11488 350 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 SYT1P21579 422 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 SLC26A2P50443 739 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 PPP2R5CQ13362 524 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 ORC2Q13416 577 aaPredicted RBP18.89■□□□□ 0.61
PRKCB-210ENST00000498739 CKAP2LQ8IYA6 745 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 SPRYD3Q8NCJ5 442 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 RDM1Q8NG50 284 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 ATP6V0A1Q93050 837 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 CTAGE1Q96RT6 745 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 NOC4LQ9BVI4 516 aaKnown RBP18.89■□□□□ 0.61
PRKCB-210ENST00000498739 TMEM60Q9H2L4 133 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 MAFBQ9Y5Q3 323 aaPredicted RBP18.89■□□□□ 0.61
PRKCB-210ENST00000498739 UMODL1Q5DID0 1318 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 NRCAMQ92823 1304 aa18.89■□□□□ 0.61
PRKCB-210ENST00000498739 POTEB3A0JP26 581 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 TREHO43280 583 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 INSRRP14616 1297 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 HOXC8P31273 242 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 CYP2C18P33260 490 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 TXKP42681 527 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 TOB1P50616 345 aaPredicted RBP18.88■□□□□ 0.61
PRKCB-210ENST00000498739 IGBP1P78318 339 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 PTK7Q13308 1070 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 GRIK4Q16099 956 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 NCAPH2Q6IBW4 605 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 POTEBQ6S5H4 581 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 TRMT1LQ7Z2T5 733 aaKnown RBP18.88■□□□□ 0.61
PRKCB-210ENST00000498739 CCDC155Q8N6L0 562 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 LMBR1Q8WVP7 490 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 TNPO1Q92973 898 aaKnown RBP18.88■□□□□ 0.61
PRKCB-210ENST00000498739 GDF15Q99988 308 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 PCDHA12Q9UN75 941 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 IGSF9BQ9UPX0 1349 aa18.88■□□□□ 0.61
PRKCB-210ENST00000498739 EML1O00423 815 aa18.87■□□□□ 0.61
PRKCB-210ENST00000498739 CCL23P55773 120 aa18.87■□□□□ 0.61
PRKCB-210ENST00000498739 BFSP2Q13515 415 aa18.87■□□□□ 0.61
PRKCB-210ENST00000498739 UGCGQ16739 394 aa18.87■□□□□ 0.61
PRKCB-210ENST00000498739 RILPL1Q5EBL4 403 aa18.87■□□□□ 0.61
PRKCB-210ENST00000498739 MFSD5Q6N075 450 aa18.87■□□□□ 0.61
PRKCB-210ENST00000498739 FERMT3Q86UX7 667 aa18.87■□□□□ 0.61
PRKCB-210ENST00000498739 ATP8B4Q8TF62 1192 aa18.87■□□□□ 0.61
PRKCB-210ENST00000498739 DHX38Q92620 1227 aaKnown RBP18.87■□□□□ 0.61
PRKCB-210ENST00000498739 MTMR9Q96QG7 549 aa18.87■□□□□ 0.61
PRKCB-210ENST00000498739 TTC12Q9H892 705 aaPredicted RBP18.87■□□□□ 0.61
PRKCB-210ENST00000498739 PCDHB6Q9Y5E3 794 aa18.87■□□□□ 0.61
PRKCB-210ENST00000498739 RRN3P2A6NIE6 340 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 HBP1O60381 514 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 OR52Z1P0C646 297 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 ATP4AP20648 1035 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 ADAM17P78536 824 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 FPGSQ05932 587 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 SPIRE1Q08AE8 756 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 SERINC5Q86VE9 423 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 TMEM199Q8N511 208 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 RETREG2Q8NC44 543 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 BANK1Q8NDB2 785 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 CAGE1Q8TC20 777 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 UBE2OQ9C0C9 1292 aaKnown RBP18.86■□□□□ 0.61
PRKCB-210ENST00000498739 WNT8AQ9H1J5 351 aa18.86■□□□□ 0.61
PRKCB-210ENST00000498739 PDE4DIPQ5VU43 2346 aa18.85■□□□□ 0.61
PRKCB-210ENST00000498739 PITPNM1O00562 1244 aa18.85■□□□□ 0.61
PRKCB-210ENST00000498739 PRKCEQ02156 737 aa18.85■□□□□ 0.61
PRKCB-210ENST00000498739 BRAPQ7Z569 592 aa18.85■□□□□ 0.61
PRKCB-210ENST00000498739 TRAPPC12Q8WVT3 735 aa18.85■□□□□ 0.61
PRKCB-210ENST00000498739 BBXQ8WY36 941 aaPredicted RBP18.85■□□□□ 0.61
PRKCB-210ENST00000498739 WNT8BQ93098 351 aa18.85■□□□□ 0.61
PRKCB-210ENST00000498739 SCLYQ96I15 445 aa18.85■□□□□ 0.61
PRKCB-210ENST00000498739 FAM167AQ96KS9 214 aa18.85■□□□□ 0.61
PRKCB-210ENST00000498739 TUBE1Q9UJT0 475 aa18.85■□□□□ 0.61
PRKCB-210ENST00000498739 COLQQ9Y215 455 aaPredicted RBP18.85■□□□□ 0.61
PRKCB-210ENST00000498739 STX6O43752 255 aa18.84■□□□□ 0.61
PRKCB-210ENST00000498739 ZNF862O60290 1169 aa18.84■□□□□ 0.61
PRKCB-210ENST00000498739 OATP04181 439 aa18.84■□□□□ 0.61
PRKCB-210ENST00000498739 CSF2RAP15509 400 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms