RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 POP1Q99575 1024 aaKnown RBP6.65□□□□□ -1.34
SPTA1-209ENST00000498708 ALDH8A1Q9H2A2 487 aaPredicted RBP6.65□□□□□ -1.34
SPTA1-209ENST00000498708 DNAAF2Q9NVR5 837 aaKnown RBP6.65□□□□□ -1.34
SPTA1-209ENST00000498708 MCM9Q9NXL9 1143 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 ZDHHC3Q9NYG2 299 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 SERTAD1Q9UHV2 236 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 NOD1Q9Y239 953 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 TANC1Q9C0D5 1861 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 A0A1W2PNR3 127 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 TMEM229AB2RXF0 380 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 CCER2I3L3R5 266 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 GOLIM4O00461 696 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 C2CD2LO14523 706 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 PRKAB2O43741 272 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 RAD21O60216 631 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 EPXP11678 715 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 KCNJ6P48051 423 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 HNRNPUQ00839 825 aaKnown RBP eCLIP6.64□□□□□ -1.35
SPTA1-209ENST00000498708 SIGLEC14Q08ET2 396 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 GPNMBQ14956 572 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 SLC9C2Q5TAH2 1124 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 FAM117BQ6P1L5 589 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 CEP85Q6P2H3 762 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 C1orf229Q6ZS94 237 aaPredicted RBP6.64□□□□□ -1.35
SPTA1-209ENST00000498708 SPICE1Q8N0Z3 855 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 STK11IPQ8N1F8 1099 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 LCORLQ8N3X6 602 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 MSL3Q8N5Y2 521 aaKnown RBP6.64□□□□□ -1.35
SPTA1-209ENST00000498708 PANK1Q8TE04 598 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 ZNF512BQ96KM6 892 aaPredicted RBP6.64□□□□□ -1.35
SPTA1-209ENST00000498708 FGD4Q96M96 766 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 RAD9AQ99638 391 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 RIOK1Q9BRS2 568 aaKnown RBP6.64□□□□□ -1.35
SPTA1-209ENST00000498708 KATNBL1Q9H079 304 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 ARMT1Q9H993 441 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 FBXO28Q9NVF7 368 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 NOP58Q9Y2X3 529 aaKnown RBP6.64□□□□□ -1.35
SPTA1-209ENST00000498708 ZNF532Q9HCE3 1301 aa6.64□□□□□ -1.35
SPTA1-209ENST00000498708 DNAJC25-GNG10A0A024R161 153 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 CYP2D7A0A087X1C5 515 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 LOC730098B7Z3J9 87 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 GNB5O14775 395 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 CABYRO75952 493 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 BAIAP3O94812 1187 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 TNKSO95271 1327 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 GJB5O95377 273 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 CHGBP05060 677 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 AKR1B1P15121 316 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 PDE6AP16499 860 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 ADH6P28332 368 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 RFC2P35250 354 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 STAT3P40763 770 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 FSCN1Q16658 493 aaKnown RBP6.63□□□□□ -1.35
SPTA1-209ENST00000498708 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.63□□□□□ -1.35
SPTA1-209ENST00000498708 CRNKL1Q9BZJ0 848 aaKnown RBP6.63□□□□□ -1.35
SPTA1-209ENST00000498708 EHD4Q9H223 541 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 ABHD16BQ9H3Z7 469 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 AVENQ9NQS1 362 aaPredicted RBP6.63□□□□□ -1.35
SPTA1-209ENST00000498708 ZNF214Q9UL59 606 aaPredicted RBP6.63□□□□□ -1.35
SPTA1-209ENST00000498708 ADAMTS5Q9UNA0 930 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 COG6Q9Y2V7 657 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 PCDHGA11Q9Y5H2 935 aa6.63□□□□□ -1.35
SPTA1-209ENST00000498708 LINC01565O15544 149 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 DYNC1LI2O43237 492 aaPredicted RBP6.62□□□□□ -1.35
SPTA1-209ENST00000498708 TBX10O75333 385 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 CENPBP07199 599 aaPredicted RBP6.62□□□□□ -1.35
SPTA1-209ENST00000498708 IFIT2P09913 472 aaKnown RBP6.62□□□□□ -1.35
SPTA1-209ENST00000498708 SKIP12755 728 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 GTF2F1P35269 517 aaKnown RBP eCLIP6.62□□□□□ -1.35
SPTA1-209ENST00000498708 TNFAIP2Q03169 654 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 TNP2Q05952 138 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 HYAL1Q12794 435 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 SMAD4Q13485 552 aaKnown RBP6.62□□□□□ -1.35
SPTA1-209ENST00000498708 GPM6BQ13491 265 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 PUM1Q14671 1186 aaKnown RBP eCLIP6.62□□□□□ -1.35
SPTA1-209ENST00000498708 PTPROQ16827 1216 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 EPC2Q52LR7 807 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 TIGD5Q53EQ6 642 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 NOL8Q76FK4 1167 aaKnown RBP6.62□□□□□ -1.35
SPTA1-209ENST00000498708 SIAH1Q8IUQ4 282 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 CCDC144CPQ8IYA2 1237 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 KIAA2013Q8IYS2 634 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 ZNF295-AS1Q8N0V1 137 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 TMEM105Q8N8V8 129 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 REPS2Q8NFH8 660 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 RHPN1Q8TCX5 695 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 DDX11Q96FC9 970 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 BTBD6Q96KE9 485 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 BOLA2Q9H3K6 86 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 ALG2Q9H553 416 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 CTNNA3Q9UI47 895 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 GNEQ9Y223 722 aaKnown RBP6.62□□□□□ -1.35
SPTA1-209ENST00000498708 RIPK3Q9Y572 518 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 DDX49Q9Y6V7 483 aaKnown RBP6.62□□□□□ -1.35
SPTA1-209ENST00000498708 NLRC5Q86WI3 1866 aa6.62□□□□□ -1.35
SPTA1-209ENST00000498708 FAM208BQ5VWN6 2430 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 VWA5AO00534 786 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 MBD4O95243 580 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 PROCP04070 461 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 SUPT20HL2P0C7V6 817 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms