RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 ATP8B4Q8TF62 1192 aa19.1■□□□□ 0.65
VIM-208ENST00000497849 INPP4AQ96PE3 977 aaPredicted RBP19.1■□□□□ 0.65
VIM-208ENST00000497849 AGO3Q9H9G7 860 aaKnown RBP19.1■□□□□ 0.65
VIM-208ENST00000497849 ZNF215Q9UL58 517 aaPredicted RBP19.1■□□□□ 0.65
VIM-208ENST00000497849 LOXHD1Q8IVV2 1947 aa19.1■□□□□ 0.65
VIM-208ENST00000497849 PRR23AA6NEV1 266 aa19.09■□□□□ 0.65
VIM-208ENST00000497849 TRIM6-TRIM34B2RNG4 842 aa19.09■□□□□ 0.65
VIM-208ENST00000497849 PER2O15055 1255 aa19.09■□□□□ 0.65
VIM-208ENST00000497849 ZBTB5O15062 677 aa19.09■□□□□ 0.65
VIM-208ENST00000497849 GALR2O43603 387 aaPredicted RBP19.09■□□□□ 0.65
VIM-208ENST00000497849 NUBP1P53384 320 aa19.09■□□□□ 0.65
VIM-208ENST00000497849 TSHZ1Q6ZSZ6 1077 aa19.09■□□□□ 0.65
VIM-208ENST00000497849 RIPOR3Q96MK2 946 aa19.09■□□□□ 0.65
VIM-208ENST00000497849 TLE6Q9H808 572 aa19.09■□□□□ 0.65
VIM-208ENST00000497849 PCDHB15Q9Y5E8 787 aa19.09■□□□□ 0.65
VIM-208ENST00000497849 BAZ2BQ9UIF8 2168 aaKnown RBP19.09■□□□□ 0.65
VIM-208ENST00000497849 GVINP1Q7Z2Y8 2422 aa19.09■□□□□ 0.65
VIM-208ENST00000497849 B4E1Z4 1266 aa19.08■□□□□ 0.64
VIM-208ENST00000497849 GCOM1H8Y6P7 765 aaPredicted RBP19.08■□□□□ 0.64
VIM-208ENST00000497849 POLR2MP0CAP2 368 aa19.08■□□□□ 0.64
VIM-208ENST00000497849 GNPTABQ3T906 1256 aa19.08■□□□□ 0.64
VIM-208ENST00000497849 PAN2Q504Q3 1202 aaKnown RBP19.08■□□□□ 0.64
VIM-208ENST00000497849 DNAJB3Q8WWF6 145 aa19.08■□□□□ 0.64
VIM-208ENST00000497849 ZSWIM5Q9P217 1185 aa19.08■□□□□ 0.64
VIM-208ENST00000497849 CDY2AQ9Y6F7 541 aa19.08■□□□□ 0.64
VIM-208ENST00000497849 MYO10Q9HD67 2058 aa19.08■□□□□ 0.64
VIM-208ENST00000497849 FRMPD4Q14CM0 1322 aa19.07■□□□□ 0.64
VIM-208ENST00000497849 ZNF213O14771 459 aa19.07■□□□□ 0.64
VIM-208ENST00000497849 CD52P31358 61 aa19.07■□□□□ 0.64
VIM-208ENST00000497849 NBL1P41271 181 aa19.07■□□□□ 0.64
VIM-208ENST00000497849 NT5C2P49902 561 aa19.07■□□□□ 0.64
VIM-208ENST00000497849 GATMP50440 423 aa19.07■□□□□ 0.64
VIM-208ENST00000497849 SLC35G1Q2M3R5 365 aa19.07■□□□□ 0.64
VIM-208ENST00000497849 NPAS4Q8IUM7 802 aa19.07■□□□□ 0.64
VIM-208ENST00000497849 RTEL1Q9NZ71 1219 aa19.07■□□□□ 0.64
VIM-208ENST00000497849 TRPC6Q9Y210 931 aa19.07■□□□□ 0.64
VIM-208ENST00000497849 MBLAC1A4D2B0 266 aaPredicted RBP19.06■□□□□ 0.64
VIM-208ENST00000497849 KLRF2D3W0D1 207 aa19.06■□□□□ 0.64
VIM-208ENST00000497849 FIBPO43427 364 aa19.06■□□□□ 0.64
VIM-208ENST00000497849 PPFIA3O75145 1194 aa19.06■□□□□ 0.64
VIM-208ENST00000497849 SP4Q02446 784 aa19.06■□□□□ 0.64
VIM-208ENST00000497849 MARCH8Q5T0T0 291 aa19.06■□□□□ 0.64
VIM-208ENST00000497849 ERMP1Q7Z2K6 904 aa19.06■□□□□ 0.64
VIM-208ENST00000497849 RSPH3Q86UC2 560 aa19.06■□□□□ 0.64
VIM-208ENST00000497849 S1PR5Q9H228 398 aa19.06■□□□□ 0.64
VIM-208ENST00000497849 MAD2L2Q9UI95 211 aa19.06■□□□□ 0.64
VIM-208ENST00000497849 TUBE1Q9UJT0 475 aa19.06■□□□□ 0.64
VIM-208ENST00000497849 FNDC1Q4ZHG4 1894 aaPredicted RBP19.05■□□□□ 0.64
VIM-208ENST00000497849 STAM2O75886 525 aa19.05■□□□□ 0.64
VIM-208ENST00000497849 PDE1AP54750 535 aa19.05■□□□□ 0.64
VIM-208ENST00000497849 PPFIA1Q13136 1202 aa19.05■□□□□ 0.64
VIM-208ENST00000497849 KCNC3Q14003 757 aa19.05■□□□□ 0.64
VIM-208ENST00000497849 GRIK4Q16099 956 aa19.05■□□□□ 0.64
VIM-208ENST00000497849 DUSP6Q16828 381 aa19.05■□□□□ 0.64
VIM-208ENST00000497849 TICAM2Q86XR7 235 aa19.05■□□□□ 0.64
VIM-208ENST00000497849 HOMER1Q86YM7 354 aa19.05■□□□□ 0.64
VIM-208ENST00000497849 TMEM105Q8N8V8 129 aa19.05■□□□□ 0.64
VIM-208ENST00000497849 MICAL1Q8TDZ2 1067 aa19.05■□□□□ 0.64
VIM-208ENST00000497849 NEK1Q96PY6 1258 aa19.05■□□□□ 0.64
VIM-208ENST00000497849 WDR87Q6ZQQ6 2873 aa19.05■□□□□ 0.64
VIM-208ENST00000497849 PALM3A6NDB9 673 aaPredicted RBP19.04■□□□□ 0.64
VIM-208ENST00000497849 TCF7P36402 384 aaPredicted RBP19.04■□□□□ 0.64
VIM-208ENST00000497849 ERVFC1P60507 584 aa19.04■□□□□ 0.64
VIM-208ENST00000497849 MRPS6P82932 125 aaKnown RBP19.04■□□□□ 0.64
VIM-208ENST00000497849 ZBTB10Q96DT7 871 aa19.04■□□□□ 0.64
VIM-208ENST00000497849 PIGSQ96S52 555 aa19.04■□□□□ 0.64
VIM-208ENST00000497849 SENP7Q9BQF6 1050 aa19.04■□□□□ 0.64
VIM-208ENST00000497849 FTHL17Q9BXU8 183 aa19.04■□□□□ 0.64
VIM-208ENST00000497849 STAG3L1P0CL83 205 aa19.03■□□□□ 0.64
VIM-208ENST00000497849 SP100P23497 879 aaPredicted RBP19.03■□□□□ 0.64
VIM-208ENST00000497849 UBE3AQ05086 875 aa19.03■□□□□ 0.64
VIM-208ENST00000497849 SYCE2Q6PIF2 218 aa19.03■□□□□ 0.64
VIM-208ENST00000497849 TMEM184AQ6ZMB5 413 aa19.03■□□□□ 0.64
VIM-208ENST00000497849 ZBTB33Q86T24 672 aa19.03■□□□□ 0.64
VIM-208ENST00000497849 CDCA3Q99618 268 aaPredicted RBP19.03■□□□□ 0.64
VIM-208ENST00000497849 PADI3Q9ULW8 664 aa19.03■□□□□ 0.64
VIM-208ENST00000497849 SQORQ9Y6N5 450 aa19.03■□□□□ 0.64
VIM-208ENST00000497849 SCG2P13521 617 aa19.02■□□□□ 0.64
VIM-208ENST00000497849 MARK3P27448 753 aa19.02■□□□□ 0.64
VIM-208ENST00000497849 ANKRD54Q6NXT1 300 aa19.02■□□□□ 0.64
VIM-208ENST00000497849 KREMEN2Q8NCW0 462 aa19.02■□□□□ 0.64
VIM-208ENST00000497849 APOL5Q9BWW9 433 aa19.02■□□□□ 0.64
VIM-208ENST00000497849 RIOX1Q9H6W3 641 aa19.02■□□□□ 0.64
VIM-208ENST00000497849 ZNF292O60281 2723 aa19.02■□□□□ 0.63
VIM-208ENST00000497849 GSTTP1A0A1W2PQM5 241 aa19.01■□□□□ 0.63
VIM-208ENST00000497849 FSCN2O14926 492 aa19.01■□□□□ 0.63
VIM-208ENST00000497849 CYTH3O43739 400 aa19.01■□□□□ 0.63
VIM-208ENST00000497849 ATP9AO75110 1047 aa19.01■□□□□ 0.63
VIM-208ENST00000497849 BRD1O95696 1058 aa19.01■□□□□ 0.63
VIM-208ENST00000497849 ID4P47928 161 aa19.01■□□□□ 0.63
VIM-208ENST00000497849 SEC23AQ15436 765 aa19.01■□□□□ 0.63
VIM-208ENST00000497849 IFIT1BQ5T764 474 aaKnown RBP19.01■□□□□ 0.63
VIM-208ENST00000497849 ANKRD45Q5TZF3 282 aa19.01■□□□□ 0.63
VIM-208ENST00000497849 FAM49AQ9H0Q0 323 aaPredicted RBP19.01■□□□□ 0.63
VIM-208ENST00000497849 TMX1Q9H3N1 280 aa19.01■□□□□ 0.63
VIM-208ENST00000497849 ERAP1Q9NZ08 941 aa19.01■□□□□ 0.63
VIM-208ENST00000497849 CDH22Q9UJ99 828 aa19.01■□□□□ 0.63
VIM-208ENST00000497849 DNAH14Q0VDD8 3507 aa19■□□□□ 0.63
VIM-208ENST00000497849 FSD2A1L4K1 749 aa19■□□□□ 0.63
VIM-208ENST00000497849 FGF18O76093 207 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms