RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 CCDC12Q8WUD4 166 aaPredicted RBP22.24■■□□□ 1.15
COL20A1-208ENST00000496810 SDF4Q9BRK5 362 aa22.24■■□□□ 1.15
COL20A1-208ENST00000496810 CERS4Q9HA82 394 aa22.24■■□□□ 1.15
COL20A1-208ENST00000496810 ERAP1Q9NZ08 941 aa22.24■■□□□ 1.15
COL20A1-208ENST00000496810 NRCAMQ92823 1304 aa22.24■■□□□ 1.15
COL20A1-208ENST00000496810 MUC3AQ02505 3323 aa22.24■■□□□ 1.15
COL20A1-208ENST00000496810 EPOPA6NHQ4 379 aa22.23■■□□□ 1.15
COL20A1-208ENST00000496810 PARNO95453 639 aaKnown RBP22.23■■□□□ 1.15
COL20A1-208ENST00000496810 CYP3A4P08684 503 aa22.23■■□□□ 1.15
COL20A1-208ENST00000496810 KCNJ6P48051 423 aa22.23■■□□□ 1.15
COL20A1-208ENST00000496810 IGBP1P78318 339 aa22.23■■□□□ 1.15
COL20A1-208ENST00000496810 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.23■■□□□ 1.15
COL20A1-208ENST00000496810 DBF4BQ8NFT6 615 aa22.23■■□□□ 1.15
COL20A1-208ENST00000496810 TRAPPC12Q8WVT3 735 aa22.23■■□□□ 1.15
COL20A1-208ENST00000496810 ZNF274Q96GC6 653 aaPredicted RBP22.23■■□□□ 1.15
COL20A1-208ENST00000496810 SMARCAD1Q9H4L7 1026 aa22.23■■□□□ 1.15
COL20A1-208ENST00000496810 EVPLQ92817 2033 aa22.23■■□□□ 1.15
COL20A1-208ENST00000496810 DHX15O43143 795 aaKnown RBP22.22■■□□□ 1.15
COL20A1-208ENST00000496810 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
COL20A1-208ENST00000496810 GNAT1P11488 350 aa22.22■■□□□ 1.15
COL20A1-208ENST00000496810 PLEKHG4Q58EX7 1191 aa22.22■■□□□ 1.15
COL20A1-208ENST00000496810 NIPA1Q7RTP0 329 aa22.22■■□□□ 1.15
COL20A1-208ENST00000496810 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.22■■□□□ 1.15
COL20A1-208ENST00000496810 CCDC148Q8NFR7 591 aa22.22■■□□□ 1.15
COL20A1-208ENST00000496810 PHOSPHO2Q8TCD6 241 aa22.22■■□□□ 1.15
COL20A1-208ENST00000496810 LENG9Q96B70 501 aa22.22■■□□□ 1.15
COL20A1-208ENST00000496810 TUBE1Q9UJT0 475 aa22.22■■□□□ 1.15
COL20A1-208ENST00000496810 TPCN1Q9ULQ1 816 aa22.22■■□□□ 1.15
COL20A1-208ENST00000496810 RFXAPO00287 272 aa22.21■■□□□ 1.15
COL20A1-208ENST00000496810 SEC24BO95487 1268 aa22.21■■□□□ 1.15
COL20A1-208ENST00000496810 CHRNA1P02708 482 aa22.21■■□□□ 1.15
COL20A1-208ENST00000496810 GNA11P29992 359 aa22.21■■□□□ 1.15
COL20A1-208ENST00000496810 TAP1Q03518 808 aa22.21■■□□□ 1.15
COL20A1-208ENST00000496810 SCRN1Q12765 414 aa22.21■■□□□ 1.15
COL20A1-208ENST00000496810 PLCB4Q15147 1175 aa22.21■■□□□ 1.15
COL20A1-208ENST00000496810 NPY5RQ15761 445 aa22.21■■□□□ 1.15
COL20A1-208ENST00000496810 FAM117BQ6P1L5 589 aa22.21■■□□□ 1.15
COL20A1-208ENST00000496810 CCDC60Q8IWA6 550 aaPredicted RBP22.21■■□□□ 1.15
COL20A1-208ENST00000496810 ABHD14A-ACY1A0A1B0GW23 586 aa22.2■■□□□ 1.14
COL20A1-208ENST00000496810 MBLAC1A4D2B0 266 aaPredicted RBP22.2■■□□□ 1.14
COL20A1-208ENST00000496810 IPO5O00410 1097 aaKnown RBP22.2■■□□□ 1.14
COL20A1-208ENST00000496810 INSRRP14616 1297 aa22.2■■□□□ 1.14
COL20A1-208ENST00000496810 SSRP1Q08945 709 aaKnown RBP22.2■■□□□ 1.14
COL20A1-208ENST00000496810 PRR16Q569H4 304 aa22.2■■□□□ 1.14
COL20A1-208ENST00000496810 PRDM6Q9NQX0 595 aa22.2■■□□□ 1.14
COL20A1-208ENST00000496810 TRPC6Q9Y210 931 aa22.2■■□□□ 1.14
COL20A1-208ENST00000496810 TTC28Q96AY4 2481 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 IGKV6D-21A0A0A0MT36 114 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 CPLX1O14810 134 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 TLL1O43897 1013 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 CAND2O75155 1236 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 ATG7O95352 703 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 LARGE1O95461 756 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 MGAT3Q09327 533 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 IKBKEQ14164 716 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 FAM26DQ5JW98 314 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 TRIM22Q8IYM9 498 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 DNAJB3Q8WWF6 145 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 GAS2L1Q99501 681 aaPredicted RBP22.19■■□□□ 1.14
COL20A1-208ENST00000496810 AZI2Q9H6S1 392 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 GJB4Q9NTQ9 266 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 NLRC5Q86WI3 1866 aa22.19■■□□□ 1.14
COL20A1-208ENST00000496810 GJB5O95377 273 aa22.18■■□□□ 1.14
COL20A1-208ENST00000496810 DEXIO95424 95 aa22.18■■□□□ 1.14
COL20A1-208ENST00000496810 STAT5BP51692 787 aa22.18■■□□□ 1.14
COL20A1-208ENST00000496810 AK2P54819 239 aa22.18■■□□□ 1.14
COL20A1-208ENST00000496810 NLRP5P59047 1200 aa22.18■■□□□ 1.14
COL20A1-208ENST00000496810 ABHD15Q6UXT9 468 aa22.18■■□□□ 1.14
COL20A1-208ENST00000496810 PPM1EQ8WY54 764 aa22.18■■□□□ 1.14
COL20A1-208ENST00000496810 GJA10Q969M2 543 aa22.18■■□□□ 1.14
COL20A1-208ENST00000496810 ZNF577Q9BSK1 485 aa22.18■■□□□ 1.14
COL20A1-208ENST00000496810 FAM49AQ9H0Q0 323 aaPredicted RBP22.18■■□□□ 1.14
COL20A1-208ENST00000496810 SH3GLB2Q9NR46 395 aa22.18■■□□□ 1.14
COL20A1-208ENST00000496810 M0R2N6 131 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 CTDNEP1O95476 244 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 GHRP10912 638 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 IGFBP4P22692 258 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 CIITAP33076 1130 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 ANAPC15P60006 121 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 SETQ01105 290 aaPredicted RBP22.17■■□□□ 1.14
COL20A1-208ENST00000496810 KRT40Q6A162 431 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 TAF2Q6P1X5 1199 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 PLPPR4Q7Z2D5 763 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 BICD2Q8TD16 824 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 PCDHA4Q9UN74 947 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 KCNJ14Q9UNX9 436 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 COL4A6Q14031 1691 aa22.17■■□□□ 1.14
COL20A1-208ENST00000496810 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.16■■□□□ 1.14
COL20A1-208ENST00000496810 BACH1O14867 736 aa22.16■■□□□ 1.14
COL20A1-208ENST00000496810 ATP4AP20648 1035 aa22.16■■□□□ 1.14
COL20A1-208ENST00000496810 TMEM62Q0P6H9 643 aa22.16■■□□□ 1.14
COL20A1-208ENST00000496810 LPIN1Q14693 890 aa22.16■■□□□ 1.14
COL20A1-208ENST00000496810 RPAINQ86UA6 219 aa22.16■■□□□ 1.14
COL20A1-208ENST00000496810 MYOCDQ8IZQ8 938 aa22.16■■□□□ 1.14
COL20A1-208ENST00000496810 ARNTL2Q8WYA1 636 aa22.16■■□□□ 1.14
COL20A1-208ENST00000496810 IL17RAQ96F46 866 aa22.16■■□□□ 1.14
COL20A1-208ENST00000496810 BRWD1Q9NSI6 2320 aa22.15■■□□□ 1.14
COL20A1-208ENST00000496810 POTEB3A0JP26 581 aa22.15■■□□□ 1.14
COL20A1-208ENST00000496810 PFKFB2O60825 505 aa22.15■■□□□ 1.14
COL20A1-208ENST00000496810 TDP2O95551 362 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms