RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 SLFN12Q8IYM2 578 aa21.74■■□□□ 1.07
CTDSP1-213ENST00000496785 ETNPPLQ8TBG4 499 aa21.74■■□□□ 1.07
CTDSP1-213ENST00000496785 RNPEPQ9H4A4 650 aa21.74■■□□□ 1.07
CTDSP1-213ENST00000496785 ZNF302Q9NR11 478 aa21.74■■□□□ 1.07
CTDSP1-213ENST00000496785 RRN3P2A6NIE6 340 aa21.73■■□□□ 1.07
CTDSP1-213ENST00000496785 PSMD10O75832 226 aa21.73■■□□□ 1.07
CTDSP1-213ENST00000496785 RPLP2P05387 115 aaKnown RBP21.73■■□□□ 1.07
CTDSP1-213ENST00000496785 GJB2P29033 226 aa21.73■■□□□ 1.07
CTDSP1-213ENST00000496785 PPFIA1Q13136 1202 aa21.73■■□□□ 1.07
CTDSP1-213ENST00000496785 PDXDC2PQ6P474 469 aa21.73■■□□□ 1.07
CTDSP1-213ENST00000496785 RPUSD2Q8IZ73 545 aaKnown RBP21.73■■□□□ 1.07
CTDSP1-213ENST00000496785 PCYT2Q99447 389 aa21.73■■□□□ 1.07
CTDSP1-213ENST00000496785 DISC1Q9NRI5 854 aa21.73■■□□□ 1.07
CTDSP1-213ENST00000496785 NOL7Q9UMY1 257 aaKnown RBP21.73■■□□□ 1.07
CTDSP1-213ENST00000496785 TRPC6Q9Y210 931 aa21.73■■□□□ 1.07
CTDSP1-213ENST00000496785 SLC37A4O43826 429 aa21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 CAND2O75155 1236 aa21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 PFKMP08237 780 aa21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 CCL23P55773 120 aa21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 ORC2Q13416 577 aaPredicted RBP21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 CUL4AQ13619 759 aa21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 EARS2Q5JPH6 523 aaKnown RBP21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 PSRC1Q6PGN9 363 aaPredicted RBP21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 SERINC5Q86VE9 423 aa21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 NOSTRINQ8IVI9 506 aa21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 CCDC60Q8IWA6 550 aaPredicted RBP21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 UIMC1Q96RL1 719 aa21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 KCNMB3Q9NPA1 279 aa21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 SETD4Q9NVD3 440 aa21.72■■□□□ 1.07
CTDSP1-213ENST00000496785 POTEB3A0JP26 581 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 FAM205CA6NFA0 338 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 H3BQV1 296 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 HBP1O60381 514 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 CSF2RAP15509 400 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 TRAPPC10P48553 1259 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 GRIK4Q16099 956 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 SWSAP1Q6NVH7 229 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 TAF2Q6P1X5 1199 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 POTEBQ6S5H4 581 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 MIER3Q7Z3K6 550 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 CKAP2LQ8IYA6 745 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 LMBR1Q8WVP7 490 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 FAM167AQ96KS9 214 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 CTAGE1Q96RT6 745 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 WNT8AQ9H1J5 351 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 MTIF3Q9H2K0 278 aaKnown RBP21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 IL23AQ9NPF7 189 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 UMODL1Q5DID0 1318 aa21.71■■□□□ 1.07
CTDSP1-213ENST00000496785 K7ELQ4 463 aaPredicted RBP21.7■■□□□ 1.06
CTDSP1-213ENST00000496785 CHMP2AO43633 222 aa21.7■■□□□ 1.06
CTDSP1-213ENST00000496785 NEMFO60524 1076 aa21.7■■□□□ 1.06
CTDSP1-213ENST00000496785 SELPP16109 830 aa21.7■■□□□ 1.06
CTDSP1-213ENST00000496785 PLCB4Q15147 1175 aa21.7■■□□□ 1.06
CTDSP1-213ENST00000496785 RSPH3Q86UC2 560 aa21.7■■□□□ 1.06
CTDSP1-213ENST00000496785 ATP8B4Q8TF62 1192 aa21.7■■□□□ 1.06
CTDSP1-213ENST00000496785 UNC45AQ9H3U1 944 aa21.7■■□□□ 1.06
CTDSP1-213ENST00000496785 TUBE1Q9UJT0 475 aa21.7■■□□□ 1.06
CTDSP1-213ENST00000496785 MAFBQ9Y5Q3 323 aaPredicted RBP21.7■■□□□ 1.06
CTDSP1-213ENST00000496785 TREHO43280 583 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 DKC1O60832 514 aaKnown RBP eCLIP21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 IQCF3P0C7M6 154 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 PDCP20941 246 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 U2AF2P26368 475 aaKnown RBP eCLIP21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 ADAM17P78536 824 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 ZNF200P98182 395 aaPredicted RBP21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 PPP2R5CQ13362 524 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 CALCRLQ16602 461 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 LRRC8DQ7L1W4 858 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 POTEDQ86YR6 584 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 BBXQ8WY36 941 aaPredicted RBP21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 DHX38Q92620 1227 aaKnown RBP21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 SNX21Q969T3 373 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 INTS4Q96HW7 963 aaKnown RBP21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 GABBR1Q9UBS5 961 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 CEP131Q9UPN4 1083 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 IGSF9BQ9UPX0 1349 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 COL1A2P08123 1366 aa21.69■■□□□ 1.06
CTDSP1-213ENST00000496785 CKBP12277 381 aa21.68■■□□□ 1.06
CTDSP1-213ENST00000496785 INSRRP14616 1297 aa21.68■■□□□ 1.06
CTDSP1-213ENST00000496785 HSCBQ8IWL3 235 aa21.68■■□□□ 1.06
CTDSP1-213ENST00000496785 SCLYQ96I15 445 aa21.68■■□□□ 1.06
CTDSP1-213ENST00000496785 PCDH10Q9P2E7 1040 aa21.68■■□□□ 1.06
CTDSP1-213ENST00000496785 KAT6AQ92794 2004 aa21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 TANC1Q9C0D5 1861 aa21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 MBLAC1A4D2B0 266 aaPredicted RBP21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 ACTN1P12814 892 aa21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 THPOP40225 353 aa21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 HIC1Q14526 733 aa21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 TRIM71Q2Q1W2 868 aaKnown RBP21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 LRIT3Q3SXY7 679 aa21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 ZNF484Q5JVG2 852 aa21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 LARP1BQ659C4 914 aaKnown RBP21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 MCTP1Q6DN14 999 aa21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 B3GNT9Q6UX72 402 aa21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 RNPC3Q96LT9 517 aaKnown RBP21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 NRBP2Q9NSY0 501 aa21.67■■□□□ 1.06
CTDSP1-213ENST00000496785 FGBP02675 491 aa21.66■■□□□ 1.06
CTDSP1-213ENST00000496785 ATP2B1P20020 1258 aa21.66■■□□□ 1.06
CTDSP1-213ENST00000496785 IGBP1P78318 339 aa21.66■■□□□ 1.06
CTDSP1-213ENST00000496785 SHHQ15465 462 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms