RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 POLR2DO15514 142 aaKnown RBP24.44■■□□□ 1.5
ECHDC3-205ENST00000496136 RARBP10826 455 aa24.44■■□□□ 1.5
ECHDC3-205ENST00000496136 CCDC73Q6ZRK6 1079 aa24.44■■□□□ 1.5
ECHDC3-205ENST00000496136 CCDC60Q8IWA6 550 aaPredicted RBP24.44■■□□□ 1.5
ECHDC3-205ENST00000496136 AP5M1Q9H0R1 490 aa24.44■■□□□ 1.5
ECHDC3-205ENST00000496136 MYH9P35579 1960 aaKnown RBP24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 POTEB3A0JP26 581 aa24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 A6NJR5 290 aa24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 SLC26A4O43511 780 aa24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 PPFIA4O75335 1185 aa24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 SYKP43405 635 aa24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 QARSP47897 775 aaKnown RBP24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 IRX5P78411 483 aaPredicted RBP24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 FAM160A1Q05DH4 1040 aa24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 POTEBQ6S5H4 581 aa24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 FMR1NBQ8N0W7 255 aaPredicted RBP24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 RASSF8Q8NHQ8 419 aa24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 NEK9Q8TD19 979 aa24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 PCYT2Q99447 389 aa24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 WRAP73Q9P2S5 460 aaPredicted RBP24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 GABBR1Q9UBS5 961 aa24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 DDX20Q9UHI6 824 aaKnown RBP24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 KIAA1024Q9UPX6 916 aa24.43■■□□□ 1.5
ECHDC3-205ENST00000496136 NR1I2O75469 434 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 PTMSP20962 102 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 UGCGQ16739 394 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 LXNQ9BS40 222 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 PRDM10Q9NQV6 1147 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 KDM3AQ9Y4C1 1321 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 BACH1O14867 736 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 ZNF202O95125 648 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 MMP3P08254 477 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 PLCG1P19174 1290 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 GJA9P57773 515 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 PSMC5P62195 406 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 RRAGBQ5VZM2 374 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 CDK5RAP3Q96JB5 506 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 NT5C3AQ9H0P0 336 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 ZSWIM4Q9H7M6 989 aa24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 DDX19AQ9NUU7 478 aaKnown RBP24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 MAFBQ9Y5Q3 323 aaPredicted RBP24.42■■□□□ 1.5
ECHDC3-205ENST00000496136 CTAGE5O15320 804 aa24.41■■□□□ 1.5
ECHDC3-205ENST00000496136 LGR5O75473 907 aa24.41■■□□□ 1.5
ECHDC3-205ENST00000496136 HOXD8P13378 290 aaPredicted RBP24.41■■□□□ 1.5
ECHDC3-205ENST00000496136 MUTP22033 750 aa24.41■■□□□ 1.5
ECHDC3-205ENST00000496136 E2F4Q16254 413 aa24.41■■□□□ 1.5
ECHDC3-205ENST00000496136 TMEM119Q4V9L6 283 aa24.41■■□□□ 1.5
ECHDC3-205ENST00000496136 POTEGQ6S5H5 508 aa24.41■■□□□ 1.5
ECHDC3-205ENST00000496136 LRRC15Q8TF66 581 aa24.41■■□□□ 1.5
ECHDC3-205ENST00000496136 ZNF302Q9NR11 478 aa24.41■■□□□ 1.5
ECHDC3-205ENST00000496136 A0A087WWV3 80 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 MSCO60682 206 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 PGK1P00558 417 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 STAT5BP51692 787 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 NKX3-2P78367 333 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 DGKDQ16760 1214 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 LONRF3Q496Y0 759 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 NAALADL2Q58DX5 795 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 KCNK18Q7Z418 384 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 IQUBQ8NA54 791 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 ATP6V0A1Q93050 837 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 DHX58Q96C10 678 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 UNC93B1Q9H1C4 597 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 UPF3AQ9H1J1 476 aaKnown RBP24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 XPNPEP3Q9NQH7 507 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 DACT1Q9NYF0 836 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 SYNRGQ9UMZ2 1314 aa24.4■■□□□ 1.5
ECHDC3-205ENST00000496136 ZNF862O60290 1169 aa24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 C6orf222P0C671 652 aaPredicted RBP24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 CPT1AP50416 773 aa24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 PSMC6P62333 389 aa24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 BEX3Q00994 111 aa24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 MTFR1Q15390 333 aa24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 UTP14CQ5TAP6 766 aaKnown RBP24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 LHX8Q68G74 356 aa24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 C4orf19Q8IY42 314 aa24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 TNS4Q8IZW8 715 aa24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 AFAP1L1Q8TED9 768 aa24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 AZI2Q9H6S1 392 aa24.39■■□□□ 1.5
ECHDC3-205ENST00000496136 ZBTB39O15060 712 aa24.39■■□□□ 1.49
ECHDC3-205ENST00000496136 LYPLA2O95372 231 aa24.39■■□□□ 1.49
ECHDC3-205ENST00000496136 MBD3O95983 291 aa24.39■■□□□ 1.49
ECHDC3-205ENST00000496136 ATP4AP20648 1035 aa24.39■■□□□ 1.49
ECHDC3-205ENST00000496136 FSCN1Q16658 493 aaKnown RBP24.39■■□□□ 1.49
ECHDC3-205ENST00000496136 PLPPR4Q7Z2D5 763 aa24.39■■□□□ 1.49
ECHDC3-205ENST00000496136 KCTD17Q8N5Z5 321 aa24.39■■□□□ 1.49
ECHDC3-205ENST00000496136 GLG1Q92896 1179 aa24.39■■□□□ 1.49
ECHDC3-205ENST00000496136 PYM1Q9BRP8 204 aaKnown RBP24.39■■□□□ 1.49
ECHDC3-205ENST00000496136 SPC25Q9HBM1 224 aa24.39■■□□□ 1.49
ECHDC3-205ENST00000496136 E9PMD0 336 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 ADAMTS4O75173 837 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 MYCP01106 439 aaPredicted RBP24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 LGALS2P05162 132 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 STAT6P42226 847 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 BRDTQ58F21 947 aaPredicted RBP24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 GNASQ5JWF2 1037 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 FAM160B1Q5W0V3 765 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 PDXDC2PQ6P474 469 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 TRIM50Q86XT4 487 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms