RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 RPL13P26373 211 aaKnown RBP12.2□□□□□ -0.46
CMSS1-208ENST00000496116 MAGEA1P43355 309 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 SMC1AQ14683 1233 aaKnown RBP12.2□□□□□ -0.46
CMSS1-208ENST00000496116 SPDYE2Q495Y8 402 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 BEND6Q5SZJ8 279 aaPredicted RBP12.2□□□□□ -0.46
CMSS1-208ENST00000496116 FKBP1CQ5VVH2 108 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 WDR93Q6P2C0 686 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 ZNF771Q7L3S4 317 aaPredicted RBP12.2□□□□□ -0.46
CMSS1-208ENST00000496116 NOA1Q8NC60 698 aaKnown RBP12.2□□□□□ -0.46
CMSS1-208ENST00000496116 CYP2W1Q8TAV3 490 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 ACER1Q8TDN7 264 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 VEZTQ9HBM0 779 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 NLRC4Q9NPP4 1024 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 PRDM4Q9UKN5 801 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 MAP2K7O14733 419 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 SRGAP2O75044 1071 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 EIF3JO75822 258 aaKnown RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 NOL4O94818 638 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 TAL1P17542 331 aaPredicted RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 GAP43P17677 238 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 POLR2FP61218 127 aaKnown RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 KCNH2Q12809 1159 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 BMT2Q1RMZ1 405 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 ASTE1Q2TB18 679 aaPredicted RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 LRCH2Q5VUJ6 765 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 CCDC174Q6PII3 467 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 EPM2AIP1Q7L775 607 aaPredicted RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 CAPZA3Q96KX2 299 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 MMS19Q96T76 1030 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 UBXN6Q9BZV1 441 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 VPS33BQ9H267 617 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 METTL14Q9HCE5 456 aaKnown RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 OLFML3Q9NRN5 406 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 TYW1Q9NV66 732 aaKnown RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 ARMCX3Q9UH62 379 aaPredicted RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 RBAK-RBAKDNI3L0D1 243 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 GCNT3O95395 438 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 PRLRP16471 622 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 MUTP22033 750 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 CASP5P51878 434 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 USP14P54578 494 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 VSNL1P62760 191 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 SETQ01105 290 aaPredicted RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 GFPT1Q06210 699 aaPredicted RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 PPP2R5CQ13362 524 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 EZH2Q15910 746 aaKnown RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 HGSNATQ68CP4 663 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 OTOP1Q7RTM1 612 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 FAM83AQ86UY5 434 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 RNF10Q8N5U6 811 aaKnown RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 MSL3Q8N5Y2 521 aaKnown RBP12.19□□□□□ -0.46
CMSS1-208ENST00000496116 GMLQ99445 158 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 ABCB6Q9NP58 842 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 ST7Q9NRC1 585 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 FEM1BQ9UK73 627 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 SNX12Q9UMY4 172 aa12.19□□□□□ -0.46
CMSS1-208ENST00000496116 CNTNAP1P78357 1384 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 TARSL2A2RTX5 802 aaKnown RBP12.18□□□□□ -0.46
CMSS1-208ENST00000496116 EML1O00423 815 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 SLC16A3O15427 465 aaKnown RBP12.18□□□□□ -0.46
CMSS1-208ENST00000496116 PSMD10O75832 226 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 PRPF6O94906 941 aaKnown RBP12.18□□□□□ -0.46
CMSS1-208ENST00000496116 XRCC5P13010 732 aaKnown RBP12.18□□□□□ -0.46
CMSS1-208ENST00000496116 MAP9Q49MG5 647 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 KIAA1755Q5JYT7 1200 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 CCDC70Q6NSX1 233 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 HOMEZQ8IX15 550 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 NOX5Q96PH1 765 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 HSD17B14Q9BPX1 270 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 CRACR2AQ9BSW2 395 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 RGL1Q9NZL6 768 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 L1RE1Q9UN81 338 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 CAPN6Q9Y6Q1 641 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 KIF13BQ9NQT8 1826 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 SMCHD1A6NHR9 2005 aa12.18□□□□□ -0.46
CMSS1-208ENST00000496116 EIF3DO15371 548 aaKnown RBP eCLIP12.17□□□□□ -0.46
CMSS1-208ENST00000496116 GAS7O60861 476 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 FAM13AO94988 1023 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 MOCS3O95396 460 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 AFPP02771 609 aaKnown RBP12.17□□□□□ -0.46
CMSS1-208ENST00000496116 MYBP10242 640 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 EPB41P11171 864 aaKnown RBP12.17□□□□□ -0.46
CMSS1-208ENST00000496116 TCP1P17987 556 aaKnown RBP12.17□□□□□ -0.46
CMSS1-208ENST00000496116 OAS2P29728 719 aaKnown RBP12.17□□□□□ -0.46
CMSS1-208ENST00000496116 CAP2P40123 477 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 PRELPP51888 382 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 RAPGEF1Q13905 1077 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 CEP55Q53EZ4 464 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 RINT1Q6NUQ1 792 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 TPH2Q8IWU9 490 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 MTMR14Q8NCE2 650 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 AGBL3Q8NEM8 1001 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 SLC5A5Q92911 643 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 WDR18Q9BV38 432 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 RUSC1Q9BVN2 902 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 WDR11Q9BZH6 1224 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 AIPL1Q9NZN9 384 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 SLITRK3O94933 977 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 RASSF7Q02833 373 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms