RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 HIC1Q14526 733 aa22.65■■□□□ 1.22
COL9A2-210ENST00000495948 HABP4Q5JVS0 413 aaKnown RBP22.65■■□□□ 1.22
COL9A2-210ENST00000495948 LMBR1Q8WVP7 490 aa22.65■■□□□ 1.22
COL9A2-210ENST00000495948 DHX38Q92620 1227 aaKnown RBP22.65■■□□□ 1.22
COL9A2-210ENST00000495948 UIMC1Q96RL1 719 aa22.65■■□□□ 1.22
COL9A2-210ENST00000495948 RNPEPQ9H4A4 650 aa22.65■■□□□ 1.22
COL9A2-210ENST00000495948 SFNP31947 248 aa22.64■■□□□ 1.21
COL9A2-210ENST00000495948 ADAM17P78536 824 aa22.64■■□□□ 1.21
COL9A2-210ENST00000495948 PPFIA1Q13136 1202 aa22.64■■□□□ 1.21
COL9A2-210ENST00000495948 B3GNT9Q6UX72 402 aa22.64■■□□□ 1.21
COL9A2-210ENST00000495948 SERINC5Q86VE9 423 aa22.64■■□□□ 1.21
COL9A2-210ENST00000495948 POTEDQ86YR6 584 aa22.64■■□□□ 1.21
COL9A2-210ENST00000495948 RDM1Q8NG50 284 aa22.64■■□□□ 1.21
COL9A2-210ENST00000495948 FAM20AQ96MK3 541 aa22.64■■□□□ 1.21
COL9A2-210ENST00000495948 ZNF302Q9NR11 478 aa22.64■■□□□ 1.21
COL9A2-210ENST00000495948 SMC3Q9UQE7 1217 aa22.64■■□□□ 1.21
COL9A2-210ENST00000495948 PCDHA10Q9Y5I2 948 aa22.64■■□□□ 1.21
COL9A2-210ENST00000495948 BACH1O14867 736 aa22.63■■□□□ 1.21
COL9A2-210ENST00000495948 PSAPP07602 524 aa22.63■■□□□ 1.21
COL9A2-210ENST00000495948 CSF2RAP15509 400 aa22.63■■□□□ 1.21
COL9A2-210ENST00000495948 ZNF200P98182 395 aaPredicted RBP22.63■■□□□ 1.21
COL9A2-210ENST00000495948 PLCB4Q15147 1175 aa22.63■■□□□ 1.21
COL9A2-210ENST00000495948 NOSTRINQ8IVI9 506 aa22.63■■□□□ 1.21
COL9A2-210ENST00000495948 TNPO1Q92973 898 aaKnown RBP22.63■■□□□ 1.21
COL9A2-210ENST00000495948 ATP6V0A1Q93050 837 aa22.63■■□□□ 1.21
COL9A2-210ENST00000495948 UNC45AQ9H3U1 944 aa22.63■■□□□ 1.21
COL9A2-210ENST00000495948 SETD4Q9NVD3 440 aa22.63■■□□□ 1.21
COL9A2-210ENST00000495948 TRIOBPQ9H2D6 2365 aa22.62■■□□□ 1.21
COL9A2-210ENST00000495948 K7ELQ4 463 aaPredicted RBP22.62■■□□□ 1.21
COL9A2-210ENST00000495948 CCL23P55773 120 aa22.62■■□□□ 1.21
COL9A2-210ENST00000495948 GNL2Q13823 731 aaKnown RBP22.62■■□□□ 1.21
COL9A2-210ENST00000495948 GRIK4Q16099 956 aa22.62■■□□□ 1.21
COL9A2-210ENST00000495948 TRIM71Q2Q1W2 868 aaKnown RBP22.62■■□□□ 1.21
COL9A2-210ENST00000495948 PSRC1Q6PGN9 363 aaPredicted RBP22.62■■□□□ 1.21
COL9A2-210ENST00000495948 GJA10Q969M2 543 aa22.62■■□□□ 1.21
COL9A2-210ENST00000495948 DISC1Q9NRI5 854 aa22.62■■□□□ 1.21
COL9A2-210ENST00000495948 TRPC6Q9Y210 931 aa22.62■■□□□ 1.21
COL9A2-210ENST00000495948 MAFBQ9Y5Q3 323 aaPredicted RBP22.62■■□□□ 1.21
COL9A2-210ENST00000495948 TREHO43280 583 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 CHMP2AO43633 222 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 NEMFO60524 1076 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 CAND2O75155 1236 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 U2AF2P26368 475 aaKnown RBP eCLIP22.61■■□□□ 1.21
COL9A2-210ENST00000495948 RFC2P35250 354 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 EPHB4P54760 987 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 PPP2R5CQ13362 524 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 ORC2Q13416 577 aaPredicted RBP22.61■■□□□ 1.21
COL9A2-210ENST00000495948 PDXDC2PQ6P474 469 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 SLFN12Q8IYM2 578 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 RETREG2Q8NC44 543 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 ATP8B4Q8TF62 1192 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 WNT8BQ93098 351 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 IL23AQ9NPF7 189 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 VAV3Q9UKW4 847 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 SAMM50Q9Y512 469 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 COL1A2P08123 1366 aa22.61■■□□□ 1.21
COL9A2-210ENST00000495948 TRIP12Q14669 1992 aaPredicted RBP22.6■■□□□ 1.21
COL9A2-210ENST00000495948 POTEB3A0JP26 581 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 MBLAC1A4D2B0 266 aaPredicted RBP22.6■■□□□ 1.21
COL9A2-210ENST00000495948 RRN3P2A6NIE6 340 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 KIF28PB7ZC32 967 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 WNT7AO00755 349 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 PARNO95453 639 aaKnown RBP22.6■■□□□ 1.21
COL9A2-210ENST00000495948 PFKMP08237 780 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 IQCF3P0C7M6 154 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 CKBP12277 381 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 SELPP16109 830 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 TRAPPC10P48553 1259 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 SWSAP1Q6NVH7 229 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 POTEBQ6S5H4 581 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 LRRC8DQ7L1W4 858 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 HAS1Q92839 578 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 SNX21Q969T3 373 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 SCLYQ96I15 445 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 TUBE1Q9UJT0 475 aa22.6■■□□□ 1.21
COL9A2-210ENST00000495948 WDR81Q562E7 1941 aa22.59■■□□□ 1.21
COL9A2-210ENST00000495948 HBP1O60381 514 aa22.59■■□□□ 1.21
COL9A2-210ENST00000495948 INSRRP14616 1297 aa22.59■■□□□ 1.21
COL9A2-210ENST00000495948 C9orf50Q5SZB4 431 aa22.59■■□□□ 1.21
COL9A2-210ENST00000495948 TAF2Q6P1X5 1199 aa22.59■■□□□ 1.21
COL9A2-210ENST00000495948 MIER3Q7Z3K6 550 aa22.59■■□□□ 1.21
COL9A2-210ENST00000495948 FAM167AQ96KS9 214 aa22.59■■□□□ 1.21
COL9A2-210ENST00000495948 GABBR1Q9UBS5 961 aa22.59■■□□□ 1.21
COL9A2-210ENST00000495948 BAG4O95429 457 aaKnown RBP22.58■■□□□ 1.21
COL9A2-210ENST00000495948 CALCRLQ16602 461 aa22.58■■□□□ 1.21
COL9A2-210ENST00000495948 LRIT3Q3SXY7 679 aa22.58■■□□□ 1.21
COL9A2-210ENST00000495948 BBXQ8WY36 941 aaPredicted RBP22.58■■□□□ 1.21
COL9A2-210ENST00000495948 INTS4Q96HW7 963 aaKnown RBP22.58■■□□□ 1.21
COL9A2-210ENST00000495948 NOL7Q9UMY1 257 aaKnown RBP22.58■■□□□ 1.21
COL9A2-210ENST00000495948 MYH9P35579 1960 aaKnown RBP22.58■■□□□ 1.2
COL9A2-210ENST00000495948 SCN5AQ14524 2016 aa22.57■■□□□ 1.2
COL9A2-210ENST00000495948 KAT6AQ92794 2004 aa22.57■■□□□ 1.2
COL9A2-210ENST00000495948 H3BQV1 296 aa22.57■■□□□ 1.2
COL9A2-210ENST00000495948 RPLP2P05387 115 aaKnown RBP22.57■■□□□ 1.2
COL9A2-210ENST00000495948 ATP4AP20648 1035 aa22.57■■□□□ 1.2
COL9A2-210ENST00000495948 SHHQ15465 462 aa22.57■■□□□ 1.2
COL9A2-210ENST00000495948 TMEM240Q5SV17 173 aa22.57■■□□□ 1.2
COL9A2-210ENST00000495948 MARCH8Q5T0T0 291 aa22.57■■□□□ 1.2
COL9A2-210ENST00000495948 TRAF7Q6Q0C0 670 aa22.57■■□□□ 1.2
COL9A2-210ENST00000495948 RPAINQ86UA6 219 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms