RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 SEZ6LQ9BYH1 1024 aa21.92■■□□□ 1.1
HDAC4-212ENST00000495497 TMEM39AQ9NV64 488 aa21.92■■□□□ 1.1
HDAC4-212ENST00000495497 SETD4Q9NVD3 440 aa21.92■■□□□ 1.1
HDAC4-212ENST00000495497 ERAP1Q9NZ08 941 aa21.92■■□□□ 1.1
HDAC4-212ENST00000495497 GABBR1Q9UBS5 961 aa21.92■■□□□ 1.1
HDAC4-212ENST00000495497 GTF2IRD1Q9UHL9 959 aa21.92■■□□□ 1.1
HDAC4-212ENST00000495497 CYP2C9P11712 490 aa21.91■■□□□ 1.1
HDAC4-212ENST00000495497 ATP4AP20648 1035 aa21.91■■□□□ 1.1
HDAC4-212ENST00000495497 RESTQ13127 1097 aa21.91■■□□□ 1.1
HDAC4-212ENST00000495497 PLCB4Q15147 1175 aa21.91■■□□□ 1.1
HDAC4-212ENST00000495497 FAM160B1Q5W0V3 765 aa21.91■■□□□ 1.1
HDAC4-212ENST00000495497 PLPPR4Q7Z2D5 763 aa21.91■■□□□ 1.1
HDAC4-212ENST00000495497 SESTD1Q86VW0 696 aa21.91■■□□□ 1.1
HDAC4-212ENST00000495497 SLFN12Q8IYM2 578 aa21.91■■□□□ 1.1
HDAC4-212ENST00000495497 C4orf32Q8N8J7 132 aa21.91■■□□□ 1.1
HDAC4-212ENST00000495497 ITGB8P26012 769 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 JAK3P52333 1124 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 SPIRE1Q08AE8 756 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 PPP2R5CQ13362 524 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 BECN1Q14457 450 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 PTGISQ16647 500 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 UGCGQ16739 394 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 RILPL1Q5EBL4 403 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 FOXD4L5Q5VV16 416 aaPredicted RBP21.9■■□□□ 1.1
HDAC4-212ENST00000495497 NCAPH2Q6IBW4 605 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 PDXDC2PQ6P474 469 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 FAM173BQ6P4H8 233 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 TRMT1LQ7Z2T5 733 aaKnown RBP21.9■■□□□ 1.1
HDAC4-212ENST00000495497 AFAP1L1Q8TED9 768 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 FOXD4L4Q8WXT5 416 aaPredicted RBP21.9■■□□□ 1.1
HDAC4-212ENST00000495497 CTAGE1Q96RT6 745 aa21.9■■□□□ 1.1
HDAC4-212ENST00000495497 TTC12Q9H892 705 aaPredicted RBP21.9■■□□□ 1.1
HDAC4-212ENST00000495497 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.9■■□□□ 1.1
HDAC4-212ENST00000495497 C17orf102A2RUQ5 167 aa21.89■■□□□ 1.09
HDAC4-212ENST00000495497 OR52Z1P0C646 297 aa21.89■■□□□ 1.09
HDAC4-212ENST00000495497 SFNP31947 248 aa21.89■■□□□ 1.09
HDAC4-212ENST00000495497 ORC2Q13416 577 aaPredicted RBP21.89■■□□□ 1.09
HDAC4-212ENST00000495497 BRAPQ7Z569 592 aa21.89■■□□□ 1.09
HDAC4-212ENST00000495497 TBX21Q9UL17 535 aa21.89■■□□□ 1.09
HDAC4-212ENST00000495497 PCDHA12Q9UN75 941 aa21.89■■□□□ 1.09
HDAC4-212ENST00000495497 TRPC6Q9Y210 931 aa21.89■■□□□ 1.09
HDAC4-212ENST00000495497 MAFBQ9Y5Q3 323 aaPredicted RBP21.89■■□□□ 1.09
HDAC4-212ENST00000495497 IGBP1P78318 339 aa21.88■■□□□ 1.09
HDAC4-212ENST00000495497 PTGDRQ13258 359 aa21.88■■□□□ 1.09
HDAC4-212ENST00000495497 BANK1Q8NDB2 785 aa21.88■■□□□ 1.09
HDAC4-212ENST00000495497 ZBTB10Q96DT7 871 aa21.88■■□□□ 1.09
HDAC4-212ENST00000495497 PPP1R12CQ9BZL4 782 aa21.88■■□□□ 1.09
HDAC4-212ENST00000495497 PRKAG2Q9UGJ0 569 aa21.88■■□□□ 1.09
HDAC4-212ENST00000495497 NOD1Q9Y239 953 aa21.88■■□□□ 1.09
HDAC4-212ENST00000495497 UMODL1Q5DID0 1318 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 POTEB3A0JP26 581 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 KIAA0355O15063 1070 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 TREHO43280 583 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 ZNF862O60290 1169 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 INSRRP14616 1297 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 HOXC8P31273 242 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 TECP42680 631 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 PPFIA1Q13136 1202 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 PKP1Q13835 747 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 POTEBQ6S5H4 581 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 CKAP2LQ8IYA6 745 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 RDM1Q8NG50 284 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 LMBR1Q8WVP7 490 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 TRAPPC12Q8WVT3 735 aa21.87■■□□□ 1.09
HDAC4-212ENST00000495497 IGSF9BQ9UPX0 1349 aa21.86■■□□□ 1.09
HDAC4-212ENST00000495497 POTEMA6NI47 508 aa21.86■■□□□ 1.09
HDAC4-212ENST00000495497 RBAK-RBAKDNI3L0D1 243 aa21.86■■□□□ 1.09
HDAC4-212ENST00000495497 EPHA7Q15375 998 aa21.86■■□□□ 1.09
HDAC4-212ENST00000495497 GRIK4Q16099 956 aa21.86■■□□□ 1.09
HDAC4-212ENST00000495497 ATP8B4Q8TF62 1192 aa21.86■■□□□ 1.09
HDAC4-212ENST00000495497 DHX38Q92620 1227 aaKnown RBP21.86■■□□□ 1.09
HDAC4-212ENST00000495497 ATP6V0A1Q93050 837 aa21.86■■□□□ 1.09
HDAC4-212ENST00000495497 WNT8BQ93098 351 aa21.86■■□□□ 1.09
HDAC4-212ENST00000495497 RAG1P15918 1043 aa21.85■■□□□ 1.09
HDAC4-212ENST00000495497 CYP2C18P33260 490 aa21.85■■□□□ 1.09
HDAC4-212ENST00000495497 SLC26A2P50443 739 aa21.85■■□□□ 1.09
HDAC4-212ENST00000495497 ADAM17P78536 824 aa21.85■■□□□ 1.09
HDAC4-212ENST00000495497 MDM2Q00987 491 aaPredicted RBP21.85■■□□□ 1.09
HDAC4-212ENST00000495497 BADQ92934 168 aa21.85■■□□□ 1.09
HDAC4-212ENST00000495497 DYDC2Q96IM9 177 aa21.85■■□□□ 1.09
HDAC4-212ENST00000495497 NOC4LQ9BVI4 516 aaKnown RBP21.85■■□□□ 1.09
HDAC4-212ENST00000495497 FTOQ9C0B1 505 aaKnown RBP eCLIP21.85■■□□□ 1.09
HDAC4-212ENST00000495497 RGL1Q9NZL6 768 aa21.85■■□□□ 1.09
HDAC4-212ENST00000495497 NRCAMQ92823 1304 aa21.84■■□□□ 1.09
HDAC4-212ENST00000495497 TIMP1P01033 207 aa21.84■■□□□ 1.09
HDAC4-212ENST00000495497 PRKCEQ02156 737 aa21.84■■□□□ 1.09
HDAC4-212ENST00000495497 CYP4A11Q02928 519 aa21.84■■□□□ 1.09
HDAC4-212ENST00000495497 CTTNQ14247 550 aaKnown RBP21.84■■□□□ 1.09
HDAC4-212ENST00000495497 IL17AQ16552 155 aa21.84■■□□□ 1.09
HDAC4-212ENST00000495497 MARCH8Q5T0T0 291 aa21.84■■□□□ 1.09
HDAC4-212ENST00000495497 HIPK3Q9H422 1215 aa21.84■■□□□ 1.09
HDAC4-212ENST00000495497 WRAP73Q9P2S5 460 aaPredicted RBP21.84■■□□□ 1.09
HDAC4-212ENST00000495497 TMEM150BA6NC51 233 aa21.83■■□□□ 1.09
HDAC4-212ENST00000495497 HBP1O60381 514 aa21.83■■□□□ 1.09
HDAC4-212ENST00000495497 STBD1O95210 358 aa21.83■■□□□ 1.09
HDAC4-212ENST00000495497 OATP04181 439 aa21.83■■□□□ 1.09
HDAC4-212ENST00000495497 ZSCAN22P10073 491 aaPredicted RBP21.83■■□□□ 1.09
HDAC4-212ENST00000495497 MAGEA10P43363 369 aaPredicted RBP21.83■■□□□ 1.09
HDAC4-212ENST00000495497 CCL23P55773 120 aa21.83■■□□□ 1.09
HDAC4-212ENST00000495497 ATP2C1P98194 919 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms