RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 MKNK2Q9HBH9 465 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 HERC5Q9UII4 1024 aaKnown RBP8.84□□□□□ -0.99
RPGR-210ENST00000494841 ZNF112Q9UJU3 913 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 MEGF11A6BM72 1044 aa8.83□□□□□ -1
RPGR-210ENST00000494841 SLC27A2O14975 620 aa8.83□□□□□ -1
RPGR-210ENST00000494841 REC8O95072 547 aa8.83□□□□□ -1
RPGR-210ENST00000494841 HUNKP57058 714 aa8.83□□□□□ -1
RPGR-210ENST00000494841 C1QTNF8P60827 252 aa8.83□□□□□ -1
RPGR-210ENST00000494841 TSNAXIP1Q2TAA8 658 aa8.83□□□□□ -1
RPGR-210ENST00000494841 CERKLQ49MI3 558 aaPredicted RBP8.83□□□□□ -1
RPGR-210ENST00000494841 FAM47AQ5JRC9 791 aa8.83□□□□□ -1
RPGR-210ENST00000494841 RRP12Q5JTH9 1297 aaKnown RBP8.83□□□□□ -1
RPGR-210ENST00000494841 CCDC84Q86UT8 332 aaPredicted RBP8.83□□□□□ -1
RPGR-210ENST00000494841 ZNF444Q8N0Y2 327 aaPredicted RBP8.83□□□□□ -1
RPGR-210ENST00000494841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.83□□□□□ -1
RPGR-210ENST00000494841 CCDC86Q9H6F5 360 aaKnown RBP8.83□□□□□ -1
RPGR-210ENST00000494841 TOMM22Q9NS69 142 aa8.83□□□□□ -1
RPGR-210ENST00000494841 ANAPC4Q9UJX5 808 aa8.83□□□□□ -1
RPGR-210ENST00000494841 ABT1Q9ULW3 272 aaKnown RBP8.83□□□□□ -1
RPGR-210ENST00000494841 OTOFQ9HC10 1997 aa8.82□□□□□ -1
RPGR-210ENST00000494841 ZMYM6O95789 1325 aa8.82□□□□□ -1
RPGR-210ENST00000494841 LAMA4Q16363 1823 aa8.82□□□□□ -1
RPGR-210ENST00000494841 ATAD5Q96QE3 1844 aa8.82□□□□□ -1
RPGR-210ENST00000494841 E7EWF7 191 aa8.82□□□□□ -1
RPGR-210ENST00000494841 MPHOSPH10O00566 681 aaKnown RBP8.82□□□□□ -1
RPGR-210ENST00000494841 RANBP6O60518 1105 aaKnown RBP8.82□□□□□ -1
RPGR-210ENST00000494841 SLC3A2P08195 630 aaKnown RBP8.82□□□□□ -1
RPGR-210ENST00000494841 AKR1B1P15121 316 aa8.82□□□□□ -1
RPGR-210ENST00000494841 CAP2P40123 477 aa8.82□□□□□ -1
RPGR-210ENST00000494841 RBM25P49756 843 aaKnown RBP8.82□□□□□ -1
RPGR-210ENST00000494841 TFAP4Q01664 338 aa8.82□□□□□ -1
RPGR-210ENST00000494841 PDE4BQ07343 736 aa8.82□□□□□ -1
RPGR-210ENST00000494841 VGLL4Q14135 290 aa8.82□□□□□ -1
RPGR-210ENST00000494841 MAP3K11Q16584 847 aa8.82□□□□□ -1
RPGR-210ENST00000494841 AKNAD1Q5T1N1 836 aa8.82□□□□□ -1
RPGR-210ENST00000494841 TTBK2Q6IQ55 1244 aa8.82□□□□□ -1
RPGR-210ENST00000494841 MFSD6Q6ZSS7 791 aa8.82□□□□□ -1
RPGR-210ENST00000494841 STOX1Q6ZVD7 989 aa8.82□□□□□ -1
RPGR-210ENST00000494841 SAPCD2Q86UD0 394 aa8.82□□□□□ -1
RPGR-210ENST00000494841 GRIN3AQ8TCU5 1115 aa8.82□□□□□ -1
RPGR-210ENST00000494841 MEGF10Q96KG7 1140 aa8.82□□□□□ -1
RPGR-210ENST00000494841 SSBP4Q9BWG4 385 aaPredicted RBP8.82□□□□□ -1
RPGR-210ENST00000494841 EMILIN2Q9BXX0 1053 aa8.82□□□□□ -1
RPGR-210ENST00000494841 SWAP70Q9UH65 585 aa8.82□□□□□ -1
RPGR-210ENST00000494841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.82□□□□□ -1
RPGR-210ENST00000494841 SAMM50Q9Y512 469 aa8.82□□□□□ -1
RPGR-210ENST00000494841 NEDD4P46934 1319 aa8.81□□□□□ -1
RPGR-210ENST00000494841 B4E1Z4 1266 aa8.81□□□□□ -1
RPGR-210ENST00000494841 NMT2O60551 498 aa8.81□□□□□ -1
RPGR-210ENST00000494841 CTNND1O60716 968 aaKnown RBP8.81□□□□□ -1
RPGR-210ENST00000494841 GH2P01242 217 aa8.81□□□□□ -1
RPGR-210ENST00000494841 PROCP04070 461 aa8.81□□□□□ -1
RPGR-210ENST00000494841 FGRP09769 529 aa8.81□□□□□ -1
RPGR-210ENST00000494841 GLB1P16278 677 aa8.81□□□□□ -1
RPGR-210ENST00000494841 GUCY1A2P33402 732 aa8.81□□□□□ -1
RPGR-210ENST00000494841 HSPA4P34932 840 aa8.81□□□□□ -1
RPGR-210ENST00000494841 GATA4P43694 442 aa8.81□□□□□ -1
RPGR-210ENST00000494841 LIG3P49916 1009 aa8.81□□□□□ -1
RPGR-210ENST00000494841 FKBP1BP68106 108 aa8.81□□□□□ -1
RPGR-210ENST00000494841 GRM1Q13255 1194 aa8.81□□□□□ -1
RPGR-210ENST00000494841 SEPT2Q15019 361 aa8.81□□□□□ -1
RPGR-210ENST00000494841 RAB3GAP1Q15042 981 aa8.81□□□□□ -1
RPGR-210ENST00000494841 ABCB5Q2M3G0 1257 aa8.81□□□□□ -1
RPGR-210ENST00000494841 ADCK5Q3MIX3 580 aa8.81□□□□□ -1
RPGR-210ENST00000494841 EXOSC6Q5RKV6 272 aaKnown RBP8.81□□□□□ -1
RPGR-210ENST00000494841 HP1BP3Q5SSJ5 553 aaPredicted RBP8.81□□□□□ -1
RPGR-210ENST00000494841 CHST3Q7LGC8 479 aa8.81□□□□□ -1
RPGR-210ENST00000494841 CLEC10AQ8IUN9 316 aa8.81□□□□□ -1
RPGR-210ENST00000494841 ANKRD13AQ8IZ07 590 aa8.81□□□□□ -1
RPGR-210ENST00000494841 STAG1Q8WVM7 1258 aa8.81□□□□□ -1
RPGR-210ENST00000494841 SUGCTQ9HAC7 445 aa8.81□□□□□ -1
RPGR-210ENST00000494841 CBX8Q9HC52 389 aa8.81□□□□□ -1
RPGR-210ENST00000494841 KRT82Q9NSB4 513 aa8.81□□□□□ -1
RPGR-210ENST00000494841 CACNA2D2Q9NY47 1150 aa8.81□□□□□ -1
RPGR-210ENST00000494841 ZSWIM5Q9P217 1185 aa8.81□□□□□ -1
RPGR-210ENST00000494841 SNX14Q9Y5W7 946 aa8.81□□□□□ -1
RPGR-210ENST00000494841 CSADQ9Y600 493 aa8.81□□□□□ -1
RPGR-210ENST00000494841 SNCAIPQ9Y6H5 919 aa8.81□□□□□ -1
RPGR-210ENST00000494841 ROBO3Q96MS0 1386 aa8.81□□□□□ -1
RPGR-210ENST00000494841 PAPPA2Q9BXP8 1791 aa8.81□□□□□ -1
RPGR-210ENST00000494841 TSPY2A6NKD2 308 aa8.8□□□□□ -1
RPGR-210ENST00000494841 ORC4O43929 436 aa8.8□□□□□ -1
RPGR-210ENST00000494841 ZNF862O60290 1169 aa8.8□□□□□ -1
RPGR-210ENST00000494841 DEFB115Q30KQ5 88 aa8.8□□□□□ -1
RPGR-210ENST00000494841 ANKRD34AQ69YU3 496 aa8.8□□□□□ -1
RPGR-210ENST00000494841 CYP4F22Q6NT55 531 aa8.8□□□□□ -1
RPGR-210ENST00000494841 LLGL2Q6P1M3 1020 aa8.8□□□□□ -1
RPGR-210ENST00000494841 CYB5R4Q7L1T6 521 aa8.8□□□□□ -1
RPGR-210ENST00000494841 SIAH1Q8IUQ4 282 aa8.8□□□□□ -1
RPGR-210ENST00000494841 SCYL3Q8IZE3 742 aa8.8□□□□□ -1
RPGR-210ENST00000494841 TMEM87AQ8NBN3 555 aa8.8□□□□□ -1
RPGR-210ENST00000494841 SMG8Q8ND04 991 aaKnown RBP8.8□□□□□ -1
RPGR-210ENST00000494841 KCNB2Q92953 911 aa8.8□□□□□ -1
RPGR-210ENST00000494841 WDR89Q96FK6 387 aaPredicted RBP8.8□□□□□ -1
RPGR-210ENST00000494841 SPOCK3Q9BQ16 436 aa8.8□□□□□ -1
RPGR-210ENST00000494841 WDR18Q9BV38 432 aa8.8□□□□□ -1
RPGR-210ENST00000494841 RNF41Q9H4P4 317 aaPredicted RBP8.8□□□□□ -1
RPGR-210ENST00000494841 ZNF287Q9HBT7 754 aa8.8□□□□□ -1
RPGR-210ENST00000494841 PICK1Q9NRD5 415 aa8.8□□□□□ -1
RPGR-210ENST00000494841 IL17RBQ9NRM6 502 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms