RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 LARGE1O95461 756 aa19.98■□□□□ 0.79
HDAC4-211ENST00000494800 ATP2A2P16615 1042 aaKnown RBP19.98■□□□□ 0.79
HDAC4-211ENST00000494800 KCNJ6P48051 423 aa19.98■□□□□ 0.79
HDAC4-211ENST00000494800 CNKSR3Q6P9H4 555 aa19.98■□□□□ 0.79
HDAC4-211ENST00000494800 ABHD15Q6UXT9 468 aa19.98■□□□□ 0.79
HDAC4-211ENST00000494800 IL27Q8NEV9 243 aa19.98■□□□□ 0.79
HDAC4-211ENST00000494800 TIFAQ96CG3 184 aa19.98■□□□□ 0.79
HDAC4-211ENST00000494800 ZSCAN31Q96LW9 406 aaPredicted RBP19.98■□□□□ 0.79
HDAC4-211ENST00000494800 SLC9A7Q96T83 725 aa19.98■□□□□ 0.79
HDAC4-211ENST00000494800 NAP1L4Q99733 375 aaKnown RBP19.98■□□□□ 0.79
HDAC4-211ENST00000494800 ZNF302Q9NR11 478 aa19.98■□□□□ 0.79
HDAC4-211ENST00000494800 MTMR10Q9NXD2 777 aa19.98■□□□□ 0.79
HDAC4-211ENST00000494800 SAMM50Q9Y512 469 aa19.98■□□□□ 0.79
HDAC4-211ENST00000494800 POTEB3A0JP26 581 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 M0R2N6 131 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 GAS7O60861 476 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 CCNE2O96020 404 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 CXCL10P02778 98 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 PSAPP07602 524 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 RBM25P49756 843 aaKnown RBP19.97■□□□□ 0.79
HDAC4-211ENST00000494800 IGBP1P78318 339 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 ADAM17P78536 824 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 Q4G0T1 1027 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 POTEBQ6S5H4 581 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 MOXD1Q6UVY6 613 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 NSUN7Q8NE18 718 aaKnown RBP19.97■□□□□ 0.79
HDAC4-211ENST00000494800 WNT8BQ93098 351 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 LENG9Q96B70 501 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 FAM161BQ96MY7 647 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 PCYT2Q99447 389 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 RIT2Q99578 217 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 PCDHA10Q9Y5I2 948 aa19.97■□□□□ 0.79
HDAC4-211ENST00000494800 CYP3A7-CYP3A51PA0A087WV96 503 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 IGKV6D-21A0A0A0MT36 114 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 WDR64B1ANS9 1081 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 MSH4O15457 936 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 NBNO60934 754 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 INSRRP14616 1297 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 CYP3A7P24462 503 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 KRT2P35908 639 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 IKBKEQ14164 716 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 PLCB4Q15147 1175 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 NPY5RQ15761 445 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 LRCH2Q5VUJ6 765 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 PDXDC2PQ6P474 469 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 CKAP2LQ8IYA6 745 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 PHOSPHO2Q8TCD6 241 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 VWCEQ96DN2 955 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 UIMC1Q96RL1 719 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 TEKT3Q9BXF9 490 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 PBX4Q9BYU1 374 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 SEMA6BQ9H3T3 888 aa19.96■□□□□ 0.79
HDAC4-211ENST00000494800 SH2B1Q9NRF2 756 aaPredicted RBP19.96■□□□□ 0.79
HDAC4-211ENST00000494800 ABHD14A-ACY1A0A1B0GW23 586 aa19.95■□□□□ 0.78
HDAC4-211ENST00000494800 GRXCR1A8MXD5 290 aa19.95■□□□□ 0.78
HDAC4-211ENST00000494800 CTSHP09668 335 aa19.95■□□□□ 0.78
HDAC4-211ENST00000494800 GCFC2P16383 781 aaKnown RBP19.95■□□□□ 0.78
HDAC4-211ENST00000494800 SFNP31947 248 aa19.95■□□□□ 0.78
HDAC4-211ENST00000494800 RABEP1Q15276 862 aa19.95■□□□□ 0.78
HDAC4-211ENST00000494800 INF2Q27J81 1249 aa19.95■□□□□ 0.78
HDAC4-211ENST00000494800 LETM2Q2VYF4 491 aa19.95■□□□□ 0.78
HDAC4-211ENST00000494800 SWSAP1Q6NVH7 229 aa19.95■□□□□ 0.78
HDAC4-211ENST00000494800 NEK8Q86SG6 692 aa19.95■□□□□ 0.78
HDAC4-211ENST00000494800 RPAINQ86UA6 219 aa19.95■□□□□ 0.78
HDAC4-211ENST00000494800 LLPHQ9BRT6 129 aaKnown RBP19.95■□□□□ 0.78
HDAC4-211ENST00000494800 DDX25Q9UHL0 483 aaKnown RBP19.95■□□□□ 0.78
HDAC4-211ENST00000494800 MBLAC1A4D2B0 266 aaPredicted RBP19.94■□□□□ 0.78
HDAC4-211ENST00000494800 KIF28PB7ZC32 967 aa19.94■□□□□ 0.78
HDAC4-211ENST00000494800 ST18O60284 1047 aa19.94■□□□□ 0.78
HDAC4-211ENST00000494800 HBP1O60381 514 aa19.94■□□□□ 0.78
HDAC4-211ENST00000494800 FDPSP14324 419 aaKnown RBP19.94■□□□□ 0.78
HDAC4-211ENST00000494800 JAK3P52333 1124 aa19.94■□□□□ 0.78
HDAC4-211ENST00000494800 TRAF7Q6Q0C0 670 aa19.94■□□□□ 0.78
HDAC4-211ENST00000494800 PIK3AP1Q6ZUJ8 805 aa19.94■□□□□ 0.78
HDAC4-211ENST00000494800 CCDC60Q8IWA6 550 aaPredicted RBP19.94■□□□□ 0.78
HDAC4-211ENST00000494800 ATP8B4Q8TF62 1192 aa19.94■□□□□ 0.78
HDAC4-211ENST00000494800 SLC5A5Q92911 643 aa19.94■□□□□ 0.78
HDAC4-211ENST00000494800 SLC28A3Q9HAS3 691 aa19.94■□□□□ 0.78
HDAC4-211ENST00000494800 PCDHA11Q9Y5I1 949 aa19.94■□□□□ 0.78
HDAC4-211ENST00000494800 LAMA2P24043 3122 aaKnown RBP19.94■□□□□ 0.78
HDAC4-211ENST00000494800 M0QZ92 97 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 JAK2O60674 1132 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 TDP2O95551 362 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 PBX2P40425 430 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 GPNMBQ14956 572 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 SAFBQ15424 915 aaKnown RBP eCLIP19.93■□□□□ 0.78
HDAC4-211ENST00000494800 PPP4R3AQ6IN85 833 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 CCDC83Q8IWF9 413 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 SEPT8Q92599 483 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 FAM167AQ96KS9 214 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 ZNF576Q9H609 170 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 DISC1Q9NRI5 854 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 GJB4Q9NTQ9 266 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 CEP131Q9UPN4 1083 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 STXBP5LQ9Y2K9 1186 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 COL1A2P08123 1366 aa19.93■□□□□ 0.78
HDAC4-211ENST00000494800 CHMP2AO43633 222 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 MARCH6O60337 910 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 CCNT1O60563 726 aaKnown RBP19.92■□□□□ 0.78
HDAC4-211ENST00000494800 DTNBO60941 627 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms