RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 MAGOHP61326 146 aaKnown RBP16.81■□□□□ 0.28
SDF4-207ENST00000494748 RUFY4Q6ZNE9 571 aa16.81■□□□□ 0.28
SDF4-207ENST00000494748 SH3RF3Q8TEJ3 882 aaPredicted RBP16.81■□□□□ 0.28
SDF4-207ENST00000494748 MAGOHBQ96A72 148 aaKnown RBP16.81■□□□□ 0.28
SDF4-207ENST00000494748 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.81■□□□□ 0.282e-20■□□□□ 10.9
SDF4-207ENST00000494748 TFCP2L1Q9NZI6 479 aa16.81■□□□□ 0.28
SDF4-207ENST00000494748 TRAF5O00463 557 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 CEP104O60308 925 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 PDIA5Q14554 519 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 ASIC2Q16515 512 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 PTPROQ16827 1216 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 TPCN2Q8NHX9 752 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 ZNF317Q96PQ6 595 aaPredicted RBP16.8■□□□□ 0.28
SDF4-207ENST00000494748 AMACRQ9UHK6 382 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 ESYT2A0FGR8 921 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 TSPY3P0CV98 308 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 TSPY8P0CW00 308 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 GHRP10912 638 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 GNA11P29992 359 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 ITPK1Q13572 414 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 ERMARDQ5T6L9 678 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 RBM46Q8TBY0 533 aaKnown RBP16.8■□□□□ 0.28
SDF4-207ENST00000494748 N4BP2L2Q92802 583 aaPredicted RBP16.8■□□□□ 0.28
SDF4-207ENST00000494748 MIEF2Q96C03 454 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 KDM4CQ9H3R0 1056 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 ODF2LQ9ULJ1 636 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 TNRC6CQ9HCJ0 1690 aaKnown RBP16.8■□□□□ 0.28
SDF4-207ENST00000494748 PGRMC1O00264 195 aaKnown RBP16.8■□□□□ 0.28
SDF4-207ENST00000494748 ACTN1P12814 892 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 USP17L2Q6R6M4 530 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 TXNRD3Q86VQ6 643 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 CACNA2D3Q8IZS8 1091 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 PIGSQ96S52 555 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 ADAM7Q9H2U9 754 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 NAGPAQ9UK23 515 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 JAG2Q9Y219 1238 aa16.8■□□□□ 0.28
SDF4-207ENST00000494748 RDXP35241 583 aaKnown RBP16.79■□□□□ 0.28
SDF4-207ENST00000494748 REXO1Q8N1G1 1221 aaKnown RBP16.79■□□□□ 0.28
SDF4-207ENST00000494748 SNX29Q8TEQ0 813 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 UBLCP1Q8WVY7 318 aaPredicted RBP16.79■□□□□ 0.28
SDF4-207ENST00000494748 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.79■□□□□ 0.288e-8■■■■□ 21.3
SDF4-207ENST00000494748 AJAP1Q9UKB5 411 aaPredicted RBP16.79■□□□□ 0.28
SDF4-207ENST00000494748 FOCADQ5VW36 1801 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 TTI1O43156 1089 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 ENOX2Q16206 610 aaKnown RBP16.79■□□□□ 0.28
SDF4-207ENST00000494748 MDM1Q8TC05 714 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 SCFD1Q8WVM8 642 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 TAF4BQ92750 862 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 CELF4Q9BZC1 486 aaKnown RBP16.79■□□□□ 0.28
SDF4-207ENST00000494748 GOLGA6L7A0A1B0GV03 622 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 TMCO5BA8MYB1 307 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 ATP8B3O60423 1300 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 PPFIA2O75334 1257 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 GIMAP7Q8NHV1 300 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 HVCN1Q96D96 273 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 BCCIPQ9P287 314 aaKnown RBP eCLIP16.79■□□□□ 0.28
SDF4-207ENST00000494748 STX8Q9UNK0 236 aa16.79■□□□□ 0.28
SDF4-207ENST00000494748 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.79■□□□□ 0.28
SDF4-207ENST00000494748 ELF3P78545 371 aaPredicted RBP16.78■□□□□ 0.28
SDF4-207ENST00000494748 MTMR3Q13615 1198 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 C10orf76Q5T2E6 689 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 ARMC9Q7Z3E5 817 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 HAS1Q92839 578 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 CENPTQ96BT3 561 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 NR2E1Q9Y466 385 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 SSBP05455 408 aaKnown RBP eCLIP16.78■□□□□ 0.28
SDF4-207ENST00000494748 FAM26FQ5R3K3 315 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 TAX1BP1Q86VP1 789 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 PSMD1Q99460 953 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 FAM129AQ9BZQ8 928 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 SLITRK6Q9H5Y7 841 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 MKNK2Q9HBH9 465 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 PANK4Q9NVE7 773 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 CCDC188H7C350 402 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 HIBADHP31937 336 aaKnown RBP16.78■□□□□ 0.28
SDF4-207ENST00000494748 ATXN2LQ8WWM7 1075 aaKnown RBP16.78■□□□□ 0.28
SDF4-207ENST00000494748 P3H4Q92791 437 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 GJA10Q969M2 543 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 SLC12A4Q9UP95 1085 aa16.78■□□□□ 0.28
SDF4-207ENST00000494748 SLC9A1P19634 815 aa16.77■□□□□ 0.28
SDF4-207ENST00000494748 GRIK5Q16478 980 aa16.77■□□□□ 0.28
SDF4-207ENST00000494748 NT5DC3Q86UY8 548 aa16.77■□□□□ 0.28
SDF4-207ENST00000494748 HES6Q96HZ4 224 aa16.77■□□□□ 0.28
SDF4-207ENST00000494748 XPO6Q96QU8 1125 aaKnown RBP16.77■□□□□ 0.28
SDF4-207ENST00000494748 TBC1D7Q9P0N9 293 aa16.77■□□□□ 0.28
SDF4-207ENST00000494748 COL24A1Q17RW2 1714 aa16.77■□□□□ 0.28
SDF4-207ENST00000494748 CCDC189A1A4V9 331 aa16.77■□□□□ 0.27
SDF4-207ENST00000494748 PRKCIP41743 596 aa16.77■□□□□ 0.27
SDF4-207ENST00000494748 NOVP48745 357 aa16.77■□□□□ 0.27
SDF4-207ENST00000494748 CDR1P51861 262 aa16.77■□□□□ 0.27
SDF4-207ENST00000494748 KCNH2Q12809 1159 aa16.77■□□□□ 0.27
SDF4-207ENST00000494748 HYIQ5T013 277 aa16.77■□□□□ 0.27
SDF4-207ENST00000494748 DCAF12L1Q5VU92 463 aa16.77■□□□□ 0.27
SDF4-207ENST00000494748 CCDC50Q8IVM0 306 aa16.77■□□□□ 0.27
SDF4-207ENST00000494748 CDK5RAP3Q96JB5 506 aa16.77■□□□□ 0.27
SDF4-207ENST00000494748 ZDHHC18Q9NUE0 388 aa16.77■□□□□ 0.27
SDF4-207ENST00000494748 SUCLA2Q9P2R7 463 aaPredicted RBP16.77■□□□□ 0.27
SDF4-207ENST00000494748 KRIT1O00522 736 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 CAND2O75155 1236 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 GNA14O95837 355 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms