RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 NEK1Q96PY6 1258 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 SMC6Q96SB8 1091 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 INSM2Q96T92 566 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 MPHOSPH6Q99547 160 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 SLF1Q9BQI6 1058 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 UBE2OQ9C0C9 1292 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 SIL1Q9H173 461 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 CCDC134Q9H6E4 229 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ATP8A2Q9NTI2 1148 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ZNHIT6Q9NWK9 470 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 UTP6Q9NYH9 597 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 ADD3Q9UEY8 706 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 DNMT3LQ9UJW3 386 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 SNX12Q9UMY4 172 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 RPL26L1Q9UNX3 145 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 TMEM98Q9Y2Y6 226 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 REXO2Q9Y3B8 237 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 L3MBTL1Q9Y468 752 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 NUB1Q9Y5A7 615 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 EMILIN1Q9Y6C2 1016 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 USP31Q70CQ4 1352 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ATP8B3O60423 1300 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 PDS5AQ29RF7 1337 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 PNPLA7Q6ZV29 1317 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 OTOFQ9HC10 1997 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 DICER1Q9UPY3 1922 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 A0A1W2PQC6 194 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 DPPA5A6NC42 116 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 FAM83GA6ND36 823 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 TMEM221A6NGB7 291 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CCT8L1PA6NM43 557 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 F6X3S4 739 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 M0R2C6 588 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 PDE2AO00408 941 aaPredicted RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 SH2B2O14492 632 aaPredicted RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 ASAP2O43150 1006 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 TEX33O43247 280 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 USO1O60763 962 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 TACC1O75410 805 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 TAF5LO75529 589 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 SURF6O75683 361 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 HEXIM1O94992 359 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 KIF4AO95239 1232 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 KRT14P02533 472 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 BCRP11274 1271 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 BMP2P12643 396 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 SKIP12755 728 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CCNB1P14635 433 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 IDEP14735 1019 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CPA3P15088 417 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 GNAZP19086 355 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CDC27P30260 824 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 GBP1P32455 592 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CD97P48960 835 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 SARSP49591 514 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 TUBP50607 506 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 FXR1P51114 621 aaKnown RBP eCLIP2.98□□□□□ -1.93
MDC1-208ENST00000494654 SEC24CP53992 1094 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 ERVK-9P63128 1117 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 KRT83P78385 493 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 ATP11AP98196 1134 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 FMR1Q06787 632 aaKnown RBP eCLIP2.98□□□□□ -1.93
MDC1-208ENST00000494654 CCDC15Q0P6D6 951 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CUL4BQ13620 913 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 NCOA4Q13772 614 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 IDI1Q13907 227 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 COL9A3Q14050 684 aaPredicted RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 BTG3Q14201 252 aaPredicted RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 MYBPC2Q14324 1141 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 SLC39A14Q15043 492 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 POSTNQ15063 836 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 PTPAQ15257 358 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 MEA1Q16626 185 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 GSTA3Q16772 222 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 IMMTQ16891 758 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 SKIDA1Q1XH10 827 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 GNPTABQ3T906 1256 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CCDC152Q4G0S7 254 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 TTC39AQ5SRH9 613 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 DAB2IPQ5VWQ8 1189 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 SPATA1Q5VX52 437 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 ARMC3Q5W041 872 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CCDC102BQ68D86 513 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 ZNF787Q6DD87 383 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 KANK3Q6NY19 840 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 SHC4Q6S5L8 630 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 SLC4A10Q6U841 1118 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 ZNF365Q70YC5 407 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CCDC80Q76M96 950 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 G2E3Q7L622 706 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CCDC65Q8IXS2 484 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 IFT20Q8IY31 132 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.98□□□□□ -1.93
MDC1-208ENST00000494654 SYCP3Q8IZU3 236 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 LINC00528Q8N1L1 170 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CLASRPQ8N2M8 674 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 SDR16C5Q8N3Y7 309 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 ENDOVQ8N8Q3 282 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 PLPP7Q8NBV4 271 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 LSM14AQ8ND56 463 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms