RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 ALS2CR12Q96Q35 445 aa12.35□□□□□ -0.43
CHMP3-209ENST00000494623 SIPA1L1O43166 1804 aa12.35□□□□□ -0.43
CHMP3-209ENST00000494623 SSU72P8A0A1W2PR75 194 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 YDJCA8MPS7 323 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 SERPING1P05155 500 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 TNNT3P45378 269 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-209ENST00000494623 MMP14P50281 582 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 MAPK8IP2Q13387 824 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-209ENST00000494623 KNOP1Q1ED39 458 aaKnown RBP12.34□□□□□ -0.43
CHMP3-209ENST00000494623 KIAA1755Q5JYT7 1200 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 CNKSR1Q969H4 720 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 CCDC102AQ96A19 550 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 EIF2AK1Q9BQI3 630 aaKnown RBP12.34□□□□□ -0.43
CHMP3-209ENST00000494623 VPS18Q9P253 973 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 HDAC9Q9UKV0 1011 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 FAM184BQ9ULE4 1060 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 C21orf2O43822 256 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 ACTN1P12814 892 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 MARSP56192 900 aaKnown RBP12.34□□□□□ -0.43
CHMP3-209ENST00000494623 UBXN2AP68543 259 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 CTTNQ14247 550 aaKnown RBP12.34□□□□□ -0.43
CHMP3-209ENST00000494623 BTNL9Q6UXG8 535 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 PIGOQ8TEQ8 1089 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 RUSC1Q9BVN2 902 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 NUCKS1Q9H1E3 243 aaKnown RBP12.34□□□□□ -0.43
CHMP3-209ENST00000494623 SMARCAL1Q9NZC9 954 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 VAV3Q9UKW4 847 aa12.34□□□□□ -0.43
CHMP3-209ENST00000494623 PJA2O43164 708 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 CHMP2AO43633 222 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 CIITAP33076 1130 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 HOXD13P35453 343 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 STAT2P52630 851 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 MRPS25P82663 173 aaKnown RBP12.33□□□□□ -0.44
CHMP3-209ENST00000494623 ZYXQ15942 572 aaKnown RBP12.33□□□□□ -0.44
CHMP3-209ENST00000494623 EDRF1Q3B7T1 1238 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 PPP4R3CPQ6ZMV5 832 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 GSPT2Q8IYD1 628 aaKnown RBP12.33□□□□□ -0.44
CHMP3-209ENST00000494623 FAM133AQ8N9E0 248 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 OSBPL9Q96SU4 736 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 ARMCX3Q9UH62 379 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-209ENST00000494623 ADAM21Q9UKJ8 722 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 SLX4Q8IY92 1834 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 CLIC2O15247 247 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 PHACTR2O75167 634 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 SLC9A1P19634 815 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 MCM3P25205 808 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 KLHL30Q0D2K2 578 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 IQCEQ6IPM2 695 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 TPH2Q8IWU9 490 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 C7orf43Q8WVR3 580 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 SYN2Q92777 582 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-209ENST00000494623 NOX5Q96PH1 765 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 ARHGEF10LQ9HCE6 1279 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 EHD2Q9NZN4 543 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 TMOD2Q9NZR1 351 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 ADAMTS1Q9UHI8 967 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 RABGAP1Q9Y3P9 1069 aa12.33□□□□□ -0.44
CHMP3-209ENST00000494623 TARSL2A2RTX5 802 aaKnown RBP12.32□□□□□ -0.44
CHMP3-209ENST00000494623 RAD17O75943 681 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 GCNT3O95395 438 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 DNA2P51530 1060 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 KCNA1Q09470 495 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 DCAF17Q5H9S7 520 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-209ENST00000494623 CCDC181Q5TID7 509 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-209ENST00000494623 TRAF3IP3Q9Y228 551 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 ATRNL1Q5VV63 1379 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 ZBTB39O15060 712 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 CALUO43852 315 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-209ENST00000494623 TBCAO75347 108 aaKnown RBP12.32□□□□□ -0.44
CHMP3-209ENST00000494623 PRLRP16471 622 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 EZH2Q15910 746 aaKnown RBP12.32□□□□□ -0.44
CHMP3-209ENST00000494623 ASIC2Q16515 512 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 HSP90B2PQ58FF3 399 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 KLHDC7AQ5VTJ3 777 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 TCERG1LQ5VWI1 586 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 CCNI2Q6ZMN8 369 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-209ENST00000494623 ARHGAP27Q6ZUM4 889 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 EPM2AIP1Q7L775 607 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-209ENST00000494623 ZC3H3Q8IXZ2 948 aaKnown RBP12.32□□□□□ -0.44
CHMP3-209ENST00000494623 LRRC1Q9BTT6 524 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 HYOU1Q9Y4L1 999 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 STK24Q9Y6E0 443 aa12.32□□□□□ -0.44
CHMP3-209ENST00000494623 A0A087X0T9 212 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 AKAP3O75969 853 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 EYA4O95677 639 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 CYP3A4P08684 503 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 FAM228BP0C875 321 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 TCP1P17987 556 aaKnown RBP12.31□□□□□ -0.44
CHMP3-209ENST00000494623 CASP4P49662 377 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 MAP9Q49MG5 647 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 CCDC70Q6NSX1 233 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 RINT1Q6NUQ1 792 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 OTOP1Q7RTM1 612 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 FRMD5Q7Z6J6 570 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 TXLNBQ8N3L3 684 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 SPATA4Q8NEY3 305 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 HDAC7Q8WUI4 952 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 DYDC2Q96IM9 177 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 POLR3CQ9BUI4 534 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms