RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 PEX11AO75192 247 aa11.05□□□□□ -0.64
LINC00488-201ENST00000494582 KIF5BP33176 963 aa11.05□□□□□ -0.64
LINC00488-201ENST00000494582 RPS6KA1Q15418 735 aa11.05□□□□□ -0.64
LINC00488-201ENST00000494582 ARHGAP22Q7Z5H3 698 aa11.05□□□□□ -0.64
LINC00488-201ENST00000494582 FAM114A1Q8IWE2 563 aa11.05□□□□□ -0.64
LINC00488-201ENST00000494582 TEX9Q8N6V9 391 aa11.05□□□□□ -0.64
LINC00488-201ENST00000494582 ENAHQ8N8S7 591 aaPredicted RBP11.05□□□□□ -0.64
LINC00488-201ENST00000494582 ATL2Q8NHH9 583 aa11.05□□□□□ -0.64
LINC00488-201ENST00000494582 IFT43Q96FT9 208 aa11.05□□□□□ -0.64
LINC00488-201ENST00000494582 PYM1Q9BRP8 204 aaKnown RBP11.05□□□□□ -0.64
LINC00488-201ENST00000494582 CCDC134Q9H6E4 229 aa11.05□□□□□ -0.64
LINC00488-201ENST00000494582 USP15Q9Y4E8 981 aaPredicted RBP11.05□□□□□ -0.64
LINC00488-201ENST00000494582 KRIT1O00522 736 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 ALDH3A1P30838 453 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 COPB2P35606 906 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 ZNF131P52739 623 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 POU5F1Q01860 360 aaKnown RBP11.04□□□□□ -0.64
LINC00488-201ENST00000494582 OR52E8Q6IFG1 317 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 TMEM154Q6P9G4 183 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 CACNA2D4Q7Z3S7 1137 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 SYNE4Q8N205 404 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 MAGEB6Q8N7X4 407 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 ACTRT1Q8TDG2 376 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 RBM41Q96IZ5 413 aaKnown RBP11.04□□□□□ -0.64
LINC00488-201ENST00000494582 CRAMP1Q96RY5 1269 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 TRIM9Q9C026 710 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 ADAMTS1Q9UHI8 967 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 UBR1Q8IWV7 1749 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 BICDL2A1A5D9 508 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 FOXO6A8MYZ6 492 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 CREB1P16220 341 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 SLCO1A2P46721 670 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 USP11P51784 963 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 SEPT2Q15019 361 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 CNGA2Q16280 664 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 SRBD1Q8N5C6 995 aaKnown RBP11.04□□□□□ -0.64
LINC00488-201ENST00000494582 LRRC57Q8N9N7 239 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 EPS8L3Q8TE67 593 aaKnown RBP11.04□□□□□ -0.64
LINC00488-201ENST00000494582 TAF4BQ92750 862 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 PLCD4Q9BRC7 762 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 ZDHHC18Q9NUE0 388 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 BCORQ6W2J9 1755 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 GLI3P10071 1580 aa11.04□□□□□ -0.64
LINC00488-201ENST00000494582 FLT1P17948 1338 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 CNTNAP5Q8WYK1 1306 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 TTC36A6NLP5 189 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 TCP11X1B4DZS4 312 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 COQ9O75208 318 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 PLCG1P19174 1290 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 ATP6V1C1P21283 382 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 PCK1P35558 622 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 RAD23BP54727 409 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 POLE2P56282 527 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 LACTBP83111 547 aaPredicted RBP11.03□□□□□ -0.64
LINC00488-201ENST00000494582 ATP11AP98196 1134 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 PDIA5Q14554 519 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 MAN2A1Q16706 1144 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 CGB2Q6NT52 195 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 TOM1L2Q6ZVM7 507 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 LONP2Q86WA8 852 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 GLIS3Q8NEA6 775 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 SUPT20HQ8NEM7 779 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 FAM81AQ8TBF8 368 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 TBC1D16Q8TBP0 767 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 MGARPQ8TDB4 240 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 PGM2Q96G03 612 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 FAM163AQ96GL9 167 aaPredicted RBP11.03□□□□□ -0.64
LINC00488-201ENST00000494582 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC00488-201ENST00000494582 KANSL2Q9H9L4 492 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 MLXIPLQ9NP71 852 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 DLGAP2Q9P1A6 1054 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 SCN11AQ9UI33 1791 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 NUP188Q5SRE5 1749 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 BCL9O00512 1426 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 PGRMC1O00264 195 aaKnown RBP11.03□□□□□ -0.64
LINC00488-201ENST00000494582 TPBGLP0DKB5 382 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 CNGA1P29973 690 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 GNAQP50148 359 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 ASIC1P78348 528 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 LBRQ14739 615 aaKnown RBP11.03□□□□□ -0.64
LINC00488-201ENST00000494582 SLC18A3Q16572 532 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 SGSM1Q2NKQ1 1148 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 METTL24Q5JXM2 366 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 ARL6IP4Q66PJ3 421 aaKnown RBP11.03□□□□□ -0.64
LINC00488-201ENST00000494582 CENPPQ6IPU0 288 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 TTLL11Q8NHH1 800 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 FMO2Q99518 471 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC00488-201ENST00000494582 RNPEPL1Q9HAU8 725 aa11.03□□□□□ -0.64
LINC00488-201ENST00000494582 DBR1Q9UK59 544 aaKnown RBP11.03□□□□□ -0.64
LINC00488-201ENST00000494582 SERPING1P05155 500 aa11.02□□□□□ -0.64
LINC00488-201ENST00000494582 NUDT17P0C025 328 aa11.02□□□□□ -0.64
LINC00488-201ENST00000494582 PEX5P50542 639 aa11.02□□□□□ -0.64
LINC00488-201ENST00000494582 SCNN1BP51168 640 aa11.02□□□□□ -0.64
LINC00488-201ENST00000494582 RCAN1P53805 252 aa11.02□□□□□ -0.64
LINC00488-201ENST00000494582 NLRP5P59047 1200 aa11.02□□□□□ -0.64
LINC00488-201ENST00000494582 MRPS35P82673 323 aaKnown RBP11.02□□□□□ -0.64
LINC00488-201ENST00000494582 TROAPQ12815 778 aa11.02□□□□□ -0.64
LINC00488-201ENST00000494582 SLC29A2Q14542 456 aa11.02□□□□□ -0.64
LINC00488-201ENST00000494582 SLC9C1Q4G0N8 1177 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms