RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 GINS2Q9Y248 185 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 RWDD3Q9Y3V2 267 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 PIK3CDO00329 1044 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 GRM6O15303 877 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 CALM1P0DP23 149 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 CALM2P0DP24 149 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 CALM3P0DP25 149 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 KCNA2P16389 499 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 ITGB5P18084 799 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 CD52P31358 61 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 BMPR1AP36894 532 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 NDUFV1P49821 464 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 MRPS6P82932 125 aaKnown RBP11.03□□□□□ -0.64
UBR4-216ENST00000494503 FAM26DQ5JW98 314 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 IER5Q5VY09 327 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 SYNE3Q6ZMZ3 975 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 TSHZ1Q6ZSZ6 1077 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 SRBD1Q8N5C6 995 aaKnown RBP11.03□□□□□ -0.64
UBR4-216ENST00000494503 NEK9Q8TD19 979 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 ALG13Q9NP73 1137 aaKnown RBP11.03□□□□□ -0.64
UBR4-216ENST00000494503 LRFN2Q9ULH4 789 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 PCDHA6Q9UN73 950 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 PCDHA8Q9Y5H6 950 aa11.03□□□□□ -0.64
UBR4-216ENST00000494503 TTC3P53804 2025 aa11.02□□□□□ -0.64
UBR4-216ENST00000494503 KIAA1671Q9BY89 1806 aa11.02□□□□□ -0.64
UBR4-216ENST00000494503 GSTTP1A0A1W2PQM5 241 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 PRR33A8MZF0 331 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 DDX39AO00148 427 aaKnown RBP11.02□□□□□ -0.65
UBR4-216ENST00000494503 SH2B2O14492 632 aaPredicted RBP11.02□□□□□ -0.65
UBR4-216ENST00000494503 DCXO43602 365 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 PPFIA3O75145 1194 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 NAPAP54920 295 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 PAK2Q13177 524 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 FBXO47Q5MNV8 452 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 TMTC2Q8N394 836 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 MAP4K1Q92918 833 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 TNPO1Q92973 898 aaKnown RBP11.02□□□□□ -0.65
UBR4-216ENST00000494503 PPP2R3CQ969Q6 453 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 PGBD1Q96JS3 809 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 TMEM87BQ96K49 555 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 MAP3K14Q99558 947 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 ANO2Q9NQ90 1003 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 SLC9A2Q9UBY0 812 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 TCEAL9Q9UHQ7 104 aa11.02□□□□□ -0.65
UBR4-216ENST00000494503 EVPLQ92817 2033 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 C5orf42Q9H799 3197 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 RRN3P2A6NIE6 340 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 ENPP3O14638 875 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 BACH1O14867 736 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 NCK2O43639 380 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 RB1P06400 928 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 INSRRP14616 1297 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 GTF2F1P35269 517 aaKnown RBP eCLIP11.01□□□□□ -0.65
UBR4-216ENST00000494503 ZNF76P36508 570 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 ADAM17P78536 824 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 MGAT3Q09327 533 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 NFX1Q12986 1120 aaKnown RBP11.01□□□□□ -0.65
UBR4-216ENST00000494503 TMEM266Q2M3C6 531 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 TRMT1LQ7Z2T5 733 aaKnown RBP11.01□□□□□ -0.65
UBR4-216ENST00000494503 MICAL1Q8TDZ2 1067 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 TRAPPC12Q8WVT3 735 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 PPP1R16BQ96T49 567 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 POP1Q99575 1024 aaKnown RBP11.01□□□□□ -0.65
UBR4-216ENST00000494503 UPF3BQ9BZI7 483 aaKnown RBP11.01□□□□□ -0.65
UBR4-216ENST00000494503 LMAN2LQ9H0V9 348 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 JADE2Q9NQC1 790 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 TRPV2Q9Y5S1 764 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 COL4A6Q14031 1691 aa11.01□□□□□ -0.65
UBR4-216ENST00000494503 PIEZO1Q92508 2521 aa11□□□□□ -0.65
UBR4-216ENST00000494503 MYH9P35579 1960 aaKnown RBP11□□□□□ -0.65
UBR4-216ENST00000494503 SLC27A2O14975 620 aa11□□□□□ -0.65
UBR4-216ENST00000494503 LINC01565O15544 149 aa11□□□□□ -0.65
UBR4-216ENST00000494503 STAG3L1P0CL83 205 aa11□□□□□ -0.65
UBR4-216ENST00000494503 SMARCA1P28370 1054 aa11□□□□□ -0.65
UBR4-216ENST00000494503 HOXD11P31277 338 aaPredicted RBP11□□□□□ -0.65
UBR4-216ENST00000494503 ADCY7P51828 1080 aa11□□□□□ -0.65
UBR4-216ENST00000494503 ACTR2P61160 394 aa11□□□□□ -0.65
UBR4-216ENST00000494503 FGD1P98174 961 aa11□□□□□ -0.65
UBR4-216ENST00000494503 ZP2Q05996 745 aa11□□□□□ -0.65
UBR4-216ENST00000494503 DLX2Q07687 328 aaPredicted RBP11□□□□□ -0.65
UBR4-216ENST00000494503 HYAL1Q12794 435 aa11□□□□□ -0.65
UBR4-216ENST00000494503 MARCH8Q5T0T0 291 aa11□□□□□ -0.65
UBR4-216ENST00000494503 TMTC3Q6ZXV5 915 aa11□□□□□ -0.65
UBR4-216ENST00000494503 RBM23Q86U06 439 aaKnown RBP11□□□□□ -0.65
UBR4-216ENST00000494503 ALYREFQ86V81 257 aaKnown RBP11□□□□□ -0.65
UBR4-216ENST00000494503 ADHFE1Q8IWW8 467 aa11□□□□□ -0.65
UBR4-216ENST00000494503 CKAP2LQ8IYA6 745 aa11□□□□□ -0.65
UBR4-216ENST00000494503 FANCBQ8NB91 859 aa11□□□□□ -0.65
UBR4-216ENST00000494503 FTHL17Q9BXU8 183 aa11□□□□□ -0.65
UBR4-216ENST00000494503 AGO3Q9H9G7 860 aaKnown RBP11□□□□□ -0.65
UBR4-216ENST00000494503 KCNH7Q9NS40 1196 aa11□□□□□ -0.65
UBR4-216ENST00000494503 UBIAD1Q9Y5Z9 338 aa11□□□□□ -0.65
UBR4-216ENST00000494503 MRPL42Q9Y6G3 142 aaKnown RBP11□□□□□ -0.65
UBR4-216ENST00000494503 POTEB3A0JP26 581 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 DENND3A2RUS2 1198 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 MBLAC1A4D2B0 266 aaPredicted RBP10.99□□□□□ -0.65
UBR4-216ENST00000494503 C5orf67F2Z3F1 127 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 STXBP3O00186 592 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 DGKIO75912 1065 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms