RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 TXKP42681 527 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 TOB1P50616 345 aaPredicted RBP11.4□□□□□ -0.58
RFC2-211ENST00000494019 STAT5BP51692 787 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 PTPN11Q06124 597 aaPredicted RBP11.4□□□□□ -0.58
RFC2-211ENST00000494019 FAAP100Q0VG06 881 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 PPP2R5CQ13362 524 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 NCAPH2Q6IBW4 605 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 BRAPQ7Z569 592 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 SESTD1Q86VW0 696 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 TOX2Q96NM4 488 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 TMEM60Q9H2L4 133 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 TRMT13Q9NUP7 481 aaKnown RBP11.4□□□□□ -0.58
RFC2-211ENST00000494019 PCDH10Q9P2E7 1040 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 VAV3Q9UKW4 847 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 MTMR6Q9Y217 621 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 NOD1Q9Y239 953 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 PCDHB6Q9Y5E3 794 aa11.4□□□□□ -0.58
RFC2-211ENST00000494019 IGKV6D-21A0A0A0MT36 114 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 CD4P01730 458 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 RESTQ13127 1097 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 PTGISQ16647 500 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 GDF6Q6KF10 455 aaPredicted RBP11.39□□□□□ -0.59
RFC2-211ENST00000494019 SWSAP1Q6NVH7 229 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 PDXDC2PQ6P474 469 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 B3GNT9Q6UX72 402 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 PLPPR4Q7Z2D5 763 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 TRMT1LQ7Z2T5 733 aaKnown RBP11.39□□□□□ -0.59
RFC2-211ENST00000494019 SH3RF1Q7Z6J0 888 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 CKAP2LQ8IYA6 745 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 RDM1Q8NG50 284 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 AFAP1L1Q8TED9 768 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 MTMR9Q96QG7 549 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 TRPV6Q9H1D0 765 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 RNPEPQ9H4A4 650 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 TTC12Q9H892 705 aaPredicted RBP11.39□□□□□ -0.59
RFC2-211ENST00000494019 TMEM39AQ9NV64 488 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 GABBR1Q9UBS5 961 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 PCDHA12Q9UN75 941 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 TRPC6Q9Y210 931 aa11.39□□□□□ -0.59
RFC2-211ENST00000494019 C17orf102A2RUQ5 167 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 POTEMA6NI47 508 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 EML1O00423 815 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 CYP2C9P11712 490 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 SLC26A2P50443 739 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 SPIRE1Q08AE8 756 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 PPFIA1Q13136 1202 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 PLCB4Q15147 1175 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 UGCGQ16739 394 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 BANK1Q8NDB2 785 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 LMBR1Q8WVP7 490 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 ATP6V0A1Q93050 837 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 PPP1R12CQ9BZL4 782 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.38□□□□□ -0.59
RFC2-211ENST00000494019 TBX21Q9UL17 535 aa11.38□□□□□ -0.59
RFC2-211ENST00000494019 MAFBQ9Y5Q3 323 aaPredicted RBP11.38□□□□□ -0.59
RFC2-211ENST00000494019 POTEB3A0JP26 581 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 TRIM43BA6NCK2 446 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 H0YGN5 161 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 RAG1P15918 1043 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 IGBP1P78318 339 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 ZNF200P98182 395 aaPredicted RBP11.37□□□□□ -0.59
RFC2-211ENST00000494019 PRKCEQ02156 737 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 PTGDRQ13258 359 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 PKP1Q13835 747 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 HIC1Q14526 733 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 GRIK4Q16099 956 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 TMEM266Q2M3C6 531 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 FOXD4L5Q5VV16 416 aaPredicted RBP11.37□□□□□ -0.59
RFC2-211ENST00000494019 POTEBQ6S5H4 581 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 FOXD4L4Q8WXT5 416 aaPredicted RBP11.37□□□□□ -0.59
RFC2-211ENST00000494019 TNPO1Q92973 898 aaKnown RBP11.37□□□□□ -0.59
RFC2-211ENST00000494019 TRIM43Q96BQ3 446 aaPredicted RBP11.37□□□□□ -0.59
RFC2-211ENST00000494019 HIPK3Q9H422 1215 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 ZSCAN16Q9H4T2 348 aaPredicted RBP11.37□□□□□ -0.59
RFC2-211ENST00000494019 SETD4Q9NVD3 440 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 MYH11P35749 1972 aa11.37□□□□□ -0.59
RFC2-211ENST00000494019 NRCAMQ92823 1304 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 LAD1O00515 517 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 KIAA0355O15063 1070 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 TREHO43280 583 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 OATP04181 439 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 ZSCAN22P10073 491 aaPredicted RBP11.36□□□□□ -0.59
RFC2-211ENST00000494019 GNAT1P11488 350 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 PDIA4P13667 645 aaKnown RBP11.36□□□□□ -0.59
RFC2-211ENST00000494019 INSRRP14616 1297 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 ATP4AP20648 1035 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 HOXC8P31273 242 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 ANP32AP39687 249 aaKnown RBP11.36□□□□□ -0.59
RFC2-211ENST00000494019 TECP42680 631 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 ATP2C1P98194 919 aaPredicted RBP11.36□□□□□ -0.59
RFC2-211ENST00000494019 CYP4A11Q02928 519 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 FAM173BQ6P4H8 233 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 CCDC155Q8N6L0 562 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 ATP8B4Q8TF62 1192 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 TRAPPC12Q8WVT3 735 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
RFC2-211ENST00000494019 FAM167AQ96KS9 214 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 CTAGE1Q96RT6 745 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 LXNQ9BS40 222 aa11.36□□□□□ -0.59
RFC2-211ENST00000494019 NOC4LQ9BVI4 516 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms