RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 RSPH10BP0C881 870 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 ATP4AP20648 1035 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 CNKSR3Q6P9H4 555 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 PLA2G4DQ86XP0 818 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 HERC6Q8IVU3 1022 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 CCDC155Q8N6L0 562 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 DBF4BQ8NFT6 615 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 GJA10Q969M2 543 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 LENG9Q96B70 501 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 CERS4Q9HA82 394 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 C6orf50Q9HD87 102 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 JPH1Q9HDC5 661 aaPredicted RBP14.38□□□□□ -0.11
HSPG2-212ENST00000493940 MSRAQ9UJ68 235 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 PCDHA11Q9Y5I1 949 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 TCF20Q9UGU0 1960 aaKnown RBP14.38□□□□□ -0.11
HSPG2-212ENST00000493940 BRWD1Q9NSI6 2320 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 TTC28Q96AY4 2481 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 IGKV6D-21A0A0A0MT36 114 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 CA3P07451 260 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 INSRRP14616 1297 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 PLCB4Q15147 1175 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 RAB30Q15771 203 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 PLEKHG4Q58EX7 1191 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 TJAP1Q5JTD0 557 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 ABHD15Q6UXT9 468 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 NIPA1Q7RTP0 329 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 REXO1Q8N1G1 1221 aaKnown RBP14.37□□□□□ -0.11
HSPG2-212ENST00000493940 IL17RAQ96F46 866 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 MTIF3Q9H2K0 278 aaKnown RBP14.37□□□□□ -0.11
HSPG2-212ENST00000493940 EHMT1Q9H9B1 1298 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 EMSYQ7Z589 1322 aa14.37□□□□□ -0.11
HSPG2-212ENST00000493940 MBLAC1A4D2B0 266 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-212ENST00000493940 ACTN1P12814 892 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 ZNF76P36508 570 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 AK2P54819 239 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 IGBP1P78318 339 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 TAP1Q03518 808 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 SSRP1Q08945 709 aaKnown RBP14.36□□□□□ -0.11
HSPG2-212ENST00000493940 MGAT3Q09327 533 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 GRIK4Q16099 956 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 FAM26DQ5JW98 314 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 CCDC60Q8IWA6 550 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-212ENST00000493940 DNAJB3Q8WWF6 145 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 GLG1Q92896 1179 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 SMARCAD1Q9H4L7 1026 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 SLC28A3Q9HAS3 691 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 ERAP1Q9NZ08 941 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 ZNF215Q9UL58 517 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-212ENST00000493940 KCNJ14Q9UNX9 436 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 NRCAMQ92823 1304 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 KIAA1671Q9BY89 1806 aa14.36□□□□□ -0.11
HSPG2-212ENST00000493940 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.35□□□□□ -0.11
HSPG2-212ENST00000493940 IPO5O00410 1097 aaKnown RBP14.35□□□□□ -0.11
HSPG2-212ENST00000493940 BAIAP3O94812 1187 aa14.35□□□□□ -0.11
HSPG2-212ENST00000493940 FDPSP14324 419 aaKnown RBP14.35□□□□□ -0.11
HSPG2-212ENST00000493940 CIITAP33076 1130 aa14.35□□□□□ -0.11
HSPG2-212ENST00000493940 STAT5BP51692 787 aa14.35□□□□□ -0.11
HSPG2-212ENST00000493940 AKAP17AQ02040 695 aaKnown RBP14.35□□□□□ -0.11
HSPG2-212ENST00000493940 PPFIA1Q13136 1202 aa14.35□□□□□ -0.11
HSPG2-212ENST00000493940 KRT40Q6A162 431 aa14.35□□□□□ -0.11
HSPG2-212ENST00000493940 FAM117BQ6P1L5 589 aa14.35□□□□□ -0.11
HSPG2-212ENST00000493940 TEX2Q8IWB9 1127 aa14.35□□□□□ -0.11
HSPG2-212ENST00000493940 NECAB1Q8N987 351 aa14.35□□□□□ -0.11
HSPG2-212ENST00000493940 PHOSPHO2Q8TCD6 241 aa14.35□□□□□ -0.11
HSPG2-212ENST00000493940 SLC9A7Q96T83 725 aa14.35□□□□□ -0.11
HSPG2-212ENST00000493940 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
HSPG2-212ENST00000493940 GLT8D2Q9H1C3 349 aa14.35□□□□□ -0.11
HSPG2-212ENST00000493940 COL4A6Q14031 1691 aa14.34□□□□□ -0.11
HSPG2-212ENST00000493940 ZBTB42B2RXF5 422 aa14.34□□□□□ -0.11
HSPG2-212ENST00000493940 PFKFB2O60825 505 aa14.34□□□□□ -0.11
HSPG2-212ENST00000493940 CENPBP07199 599 aaPredicted RBP14.34□□□□□ -0.11
HSPG2-212ENST00000493940 GNA11P29992 359 aa14.34□□□□□ -0.11
HSPG2-212ENST00000493940 NLRP5P59047 1200 aa14.34□□□□□ -0.11
HSPG2-212ENST00000493940 ST3GAL1Q11201 340 aa14.34□□□□□ -0.11
HSPG2-212ENST00000493940 ME3Q16798 604 aa14.34□□□□□ -0.11
HSPG2-212ENST00000493940 PRR16Q569H4 304 aa14.34□□□□□ -0.11
HSPG2-212ENST00000493940 PPP2R2DQ66LE6 453 aa14.34□□□□□ -0.11
HSPG2-212ENST00000493940 PLPPR4Q7Z2D5 763 aa14.34□□□□□ -0.11
HSPG2-212ENST00000493940 SH3GLB2Q9NR46 395 aa14.34□□□□□ -0.11
HSPG2-212ENST00000493940 ABHD14A-ACY1A0A1B0GW23 586 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 MSH4O15457 936 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 PARNO95453 639 aaKnown RBP14.33□□□□□ -0.12
HSPG2-212ENST00000493940 GNAT1P11488 350 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 ANAPC15P60006 121 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 TMEM62Q0P6H9 643 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 IKBKEQ14164 716 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 LPIN1Q14693 890 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 CCDC85BQ15834 202 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-212ENST00000493940 EARS2Q5JPH6 523 aaKnown RBP14.33□□□□□ -0.12
HSPG2-212ENST00000493940 SWSAP1Q6NVH7 229 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 RPAINQ86UA6 219 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 OXER1Q8TDS5 423 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 TBCKQ8TEA7 893 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 CCDC12Q8WUD4 166 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-212ENST00000493940 PPM1EQ8WY54 764 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 ZNF577Q9BSK1 485 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 AGO3Q9H9G7 860 aaKnown RBP14.33□□□□□ -0.12
HSPG2-212ENST00000493940 CDHR5Q9HBB8 845 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 TUBE1Q9UJT0 475 aa14.33□□□□□ -0.12
HSPG2-212ENST00000493940 PCDHA4Q9UN74 947 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms