RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 ACSL6Q9UKU0 697 aa6.66□□□□□ -1.34
CCNB3-208ENST00000493507 YBX2Q9Y2T7 364 aaKnown RBP6.66□□□□□ -1.34
CCNB3-208ENST00000493507 THRAP3Q9Y2W1 955 aaKnown RBP6.66□□□□□ -1.34
CCNB3-208ENST00000493507 PARD3Q8TEW0 1356 aa6.66□□□□□ -1.34
CCNB3-208ENST00000493507 DLX3O60479 287 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 NPHS1O60500 1241 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 FAM153BP0C7A2 387 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 PNLIPP16233 465 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 PRKCAP17252 672 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 RRS1Q15050 365 aaKnown RBP6.65□□□□□ -1.34
CCNB3-208ENST00000493507 NOP9Q86U38 636 aaKnown RBP6.65□□□□□ -1.34
CCNB3-208ENST00000493507 CPNE8Q86YQ8 564 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 PPIL6Q8IXY8 311 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 JMYQ8N9B5 988 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 NUP43Q8NFH3 380 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 DIO2Q92813 273 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 OSBP2Q969R2 916 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 SHISA4Q96DD7 197 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 PLCD4Q9BRC7 762 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 SLC6A17Q9H1V8 727 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 PIF1Q9H611 641 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 FAM53CQ9NYF3 392 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 IMPACTQ9P2X3 320 aa6.65□□□□□ -1.34
CCNB3-208ENST00000493507 WDR17Q8IZU2 1322 aa6.65□□□□□ -1.35
CCNB3-208ENST00000493507 ADAMTS7Q9UKP4 1686 aa6.65□□□□□ -1.35
CCNB3-208ENST00000493507 COL24A1Q17RW2 1714 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 TRBV23-1A0A0A0MS06 115 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 CCDC163A0A0D9SF12 145 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 A0A1W2PQJ5 194 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 LTBRP36941 435 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 TMF1P82094 1093 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 CYP4F8P98187 520 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 DDB1Q16531 1140 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 PRSS53Q2L4Q9 553 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 C2orf27AQ580R0 203 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 YOD1Q5VVQ6 348 aaPredicted RBP6.64□□□□□ -1.35
CCNB3-208ENST00000493507 LILRB2Q8N423 598 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 ZSWIM2Q8NEG5 633 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 C1orf159Q96HA4 380 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 SYT17Q9BSW7 474 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 PDLIM7Q9NR12 457 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 WASHC2AQ641Q2 1341 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 NSD2O96028 1365 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 CCDC7Q96M83 1385 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 QSER1Q2KHR3 1735 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 SIPA1L3O60292 1781 aaPredicted RBP6.64□□□□□ -1.35
CCNB3-208ENST00000493507 SCN11AQ9UI33 1791 aa6.64□□□□□ -1.35
CCNB3-208ENST00000493507 OVOS2A0A0G2JMS6 1433 aa6.63□□□□□ -1.35
CCNB3-208ENST00000493507 C7orf72A4D263 438 aa6.63□□□□□ -1.35
CCNB3-208ENST00000493507 RTL1A6NKG5 1358 aa6.63□□□□□ -1.35
CCNB3-208ENST00000493507 MYO1BO43795 1136 aa6.63□□□□□ -1.35
CCNB3-208ENST00000493507 C5P01031 1676 aa6.63□□□□□ -1.35
CCNB3-208ENST00000493507 SUMO1P63165 101 aaKnown RBP6.63□□□□□ -1.35
CCNB3-208ENST00000493507 MVKQ03426 396 aa6.63□□□□□ -1.35
CCNB3-208ENST00000493507 TXNRD1Q16881 649 aa6.63□□□□□ -1.35
CCNB3-208ENST00000493507 MPZL3Q6UWV2 235 aa6.63□□□□□ -1.35
CCNB3-208ENST00000493507 TOM1L2Q6ZVM7 507 aa6.63□□□□□ -1.35
CCNB3-208ENST00000493507 DHRS4Q9BTZ2 278 aa6.63□□□□□ -1.35
CCNB3-208ENST00000493507 DLG5Q8TDM6 1919 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 COL5A3P25940 1745 aaPredicted RBP6.62□□□□□ -1.35
CCNB3-208ENST00000493507 TJP1Q07157 1748 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 HOXC9P31274 260 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 GTF2A2P52657 109 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 SLC15A2Q16348 729 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 DENND5AQ6IQ26 1287 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 RSPO2Q6UXX9 243 aaPredicted RBP6.62□□□□□ -1.35
CCNB3-208ENST00000493507 USP53Q70EK8 1073 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 HDGFL2Q7Z4V5 671 aaPredicted RBP6.62□□□□□ -1.35
CCNB3-208ENST00000493507 IRF2BP1Q8IU81 584 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 CCDC103Q8IW40 242 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 SIRT2Q8IXJ6 389 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 LZTR1Q8N653 840 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 DCAF4Q8WV16 495 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 INTS4Q96HW7 963 aaKnown RBP6.62□□□□□ -1.35
CCNB3-208ENST00000493507 TMEFF2Q9UIK5 374 aaPredicted RBP6.62□□□□□ -1.35
CCNB3-208ENST00000493507 TIMM13Q9Y5L4 95 aaPredicted RBP6.62□□□□□ -1.35
CCNB3-208ENST00000493507 NPFFR2Q9Y5X5 522 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 KAT6BQ8WYB5 2073 aa6.62□□□□□ -1.35
CCNB3-208ENST00000493507 ZNF503-AS2A6NEH8 195 aa6.61□□□□□ -1.35
CCNB3-208ENST00000493507 EFEMP2O95967 443 aa6.61□□□□□ -1.35
CCNB3-208ENST00000493507 MPOP05164 745 aa6.61□□□□□ -1.35
CCNB3-208ENST00000493507 RPL11P62913 178 aaKnown RBP6.61□□□□□ -1.35
CCNB3-208ENST00000493507 INF2Q27J81 1249 aa6.61□□□□□ -1.35
CCNB3-208ENST00000493507 FAM209AQ5JX71 171 aa6.61□□□□□ -1.35
CCNB3-208ENST00000493507 FOXB2Q5VYV0 432 aa6.61□□□□□ -1.35
CCNB3-208ENST00000493507 MBLAC2Q68D91 279 aa6.61□□□□□ -1.35
CCNB3-208ENST00000493507 ZFYVE21Q9BQ24 234 aa6.61□□□□□ -1.35
CCNB3-208ENST00000493507 GPR27Q9NS67 375 aa6.61□□□□□ -1.35
CCNB3-208ENST00000493507 TERF2IPQ9NYB0 399 aa6.61□□□□□ -1.35
CCNB3-208ENST00000493507 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.61□□□□□ -1.35
CCNB3-208ENST00000493507 BCL9O00512 1426 aa6.6□□□□□ -1.35
CCNB3-208ENST00000493507 UBR3Q6ZT12 1888 aa6.6□□□□□ -1.35
CCNB3-208ENST00000493507 C4AP0C0L4 1744 aa6.6□□□□□ -1.35
CCNB3-208ENST00000493507 C4BP0C0L5 1744 aa6.6□□□□□ -1.35
CCNB3-208ENST00000493507 OR14I1A6ND48 311 aa6.6□□□□□ -1.35
CCNB3-208ENST00000493507 ARNTLO00327 626 aa6.6□□□□□ -1.35
CCNB3-208ENST00000493507 EXOC5O00471 708 aa6.6□□□□□ -1.35
CCNB3-208ENST00000493507 IGSF3O75054 1194 aa6.6□□□□□ -1.35
CCNB3-208ENST00000493507 MSL3P1P0C860 447 aa6.6□□□□□ -1.35
CCNB3-208ENST00000493507 PDE6BP35913 854 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms