RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 HALP42357 657 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 KIF23Q02241 960 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-212ENST00000493341 ESRP1Q6NXG1 681 aaKnown RBP5.8□□□□□ -1.48
VPS13A-212ENST00000493341 BEND4Q6ZU67 534 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 C22orf34Q6ZV56 151 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 NOSTRINQ8IVI9 506 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 FAM20CQ8IXL6 584 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 ZZZ3Q8IYH5 903 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 CPXCR1Q8N123 301 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 FAM43AQ8N2R8 423 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 ACRBPQ8NEB7 543 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 WFDC12Q8WWY7 111 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 HPS3Q969F9 1004 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 TBC1D32Q96NH3 1257 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 ORAI2Q96SN7 254 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 ACSS2Q9NR19 701 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 ZSWIM5Q9P217 1185 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 GULP1Q9UBP9 304 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 PCDHGB6Q9Y5F9 930 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 GPR45Q9Y5Y3 372 aa5.8□□□□□ -1.48
VPS13A-212ENST00000493341 F5H423 210 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-212ENST00000493341 H7BY64 318 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 PIP5K1CO60331 668 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 NDUFS2O75306 463 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 CYP17A1P05093 508 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 CLEC2LP0C7M8 214 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 TMEM253P0C7T8 217 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 ENPP1P22413 925 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 LTKP29376 864 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 FXR1P51114 621 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS13A-212ENST00000493341 ADKP55263 362 aaKnown RBP5.79□□□□□ -1.48
VPS13A-212ENST00000493341 LMOD3Q0VAK6 560 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 KIAA0753Q2KHM9 967 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 UVSSAQ2YD98 709 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 CT83Q5H943 113 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 OGFOD3Q6PK18 319 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 CYP2R1Q6VVX0 501 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 OTOP3Q7RTS5 596 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 SMAP1Q8IYB5 467 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-212ENST00000493341 ARMC10Q8N2F6 343 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 SCLT1Q96NL6 688 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 FAM193BQ96PV7 902 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-212ENST00000493341 FNIP2Q9P278 1114 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 IGF2BP3O00425 579 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS13A-212ENST00000493341 MAN2B1O00754 1011 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 PQBP1O60828 265 aaKnown RBP5.79□□□□□ -1.48
VPS13A-212ENST00000493341 DGKIO75912 1065 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 ZBED1O96006 694 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 SLC5A1P13866 664 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 RPL10P27635 214 aaKnown RBP5.79□□□□□ -1.48
VPS13A-212ENST00000493341 FSCN1Q16658 493 aaKnown RBP5.79□□□□□ -1.48
VPS13A-212ENST00000493341 PPP1R35Q8TAP8 253 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 PIP4K2CQ8TBX8 421 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 SH3RF2Q8TEC5 729 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 HERPUD2Q9BSE4 406 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 APOL5Q9BWW9 433 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 CD244Q9BZW8 370 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 CASS4Q9NQ75 786 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 LUZP4Q9P127 313 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 DUSP13Q9UII6 198 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 SERPINB13Q9UIV8 391 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 DSEQ9UL01 958 aa5.79□□□□□ -1.48
VPS13A-212ENST00000493341 C22orf46C9J442 243 aa5.78□□□□□ -1.48
VPS13A-212ENST00000493341 PIK3R2O00459 728 aa5.78□□□□□ -1.48
VPS13A-212ENST00000493341 CYP27C1Q4G0S4 372 aa5.78□□□□□ -1.48
VPS13A-212ENST00000493341 ARHGAP27Q6ZUM4 889 aa5.78□□□□□ -1.48
VPS13A-212ENST00000493341 OVCH2Q7RTZ1 564 aa5.78□□□□□ -1.48
VPS13A-212ENST00000493341 SVOPQ8N4V2 548 aa5.78□□□□□ -1.48
VPS13A-212ENST00000493341 UBE2FQ969M7 185 aa5.78□□□□□ -1.48
VPS13A-212ENST00000493341 EAF2Q96CJ1 260 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-212ENST00000493341 MKL2Q9ULH7 1088 aa5.78□□□□□ -1.48
VPS13A-212ENST00000493341 SRPK3Q9UPE1 567 aa5.78□□□□□ -1.48
VPS13A-212ENST00000493341 COA3Q9Y2R0 106 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-212ENST00000493341 B3GALT1Q9Y5Z6 326 aa5.78□□□□□ -1.48
VPS13A-212ENST00000493341 MORC2Q9Y6X9 1032 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-212ENST00000493341 ABHD14A-ACY1A0A1B0GW23 586 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 H3BS24 57 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 PDCP20941 246 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 MTNR1BP49286 362 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 ALDH5A1P51649 535 aaPredicted RBP5.77□□□□□ -1.49
VPS13A-212ENST00000493341 NRG1Q02297 640 aaPredicted RBP5.77□□□□□ -1.49
VPS13A-212ENST00000493341 SEC23AQ15436 765 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 WDR78Q5VTH9 848 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 RNF111Q6ZNA4 994 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 CCDC138Q96M89 665 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 SEMA4AQ9H3S1 761 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 SMOC1Q9H4F8 434 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 EPB41L1Q9H4G0 881 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 ZNF277Q9NRM2 450 aaPredicted RBP5.77□□□□□ -1.49
VPS13A-212ENST00000493341 TUBD1Q9UJT1 453 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 TMEM82A0PJX8 343 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 FUCA1P04066 466 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 ZKSCAN1P17029 563 aaPredicted RBP5.77□□□□□ -1.49
VPS13A-212ENST00000493341 ADMP35318 185 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 ECE1P42892 770 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 UGT8Q16880 541 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 FIGNQ5HY92 759 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 CCDC62Q6P9F0 684 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 USP45Q70EL2 814 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 ZNF765Q7L2R6 523 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms