RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 NFRKBQ6P4R8 1299 aa15.12■□□□□ 0.01
MSH6-208ENST00000493177 DTHD1Q6ZMT9 781 aa15.12■□□□□ 0.01
MSH6-208ENST00000493177 C4orf32Q8N8J7 132 aa15.12■□□□□ 0.01
MSH6-208ENST00000493177 GJA10Q969M2 543 aa15.12■□□□□ 0.01
MSH6-208ENST00000493177 LENG9Q96B70 501 aa15.12■□□□□ 0.01
MSH6-208ENST00000493177 INPP4AQ96PE3 977 aaPredicted RBP15.12■□□□□ 0.01
MSH6-208ENST00000493177 KCNH7Q9NS40 1196 aa15.12■□□□□ 0.01
MSH6-208ENST00000493177 TRMT13Q9NUP7 481 aaKnown RBP15.12■□□□□ 0.01
MSH6-208ENST00000493177 VWA3AA6NCI4 1184 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 GOLGA6L4A6NEF3 574 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 DDX39AO00148 427 aaKnown RBP15.11■□□□□ 0.01
MSH6-208ENST00000493177 PPP6R2O75170 966 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 ZNF286BP0CG31 522 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 ACRP10323 421 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 TGFB3P10600 412 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 CYP2C9P11712 490 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 UBA1P22314 1058 aaKnown RBP15.11■□□□□ 0.01
MSH6-208ENST00000493177 PTPN11Q06124 597 aaPredicted RBP15.11■□□□□ 0.01
MSH6-208ENST00000493177 CELF3Q5SZQ8 465 aaKnown RBP15.11■□□□□ 0.01
MSH6-208ENST00000493177 PSRC1Q6PGN9 363 aaPredicted RBP15.11■□□□□ 0.01
MSH6-208ENST00000493177 CLEC17AQ6ZS10 378 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 SLFN12Q8IYM2 578 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 DEFB123Q8N688 67 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 CCDC155Q8N6L0 562 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 C7orf31Q8N865 590 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 KRI1Q8N9T8 703 aaKnown RBP15.11■□□□□ 0.01
MSH6-208ENST00000493177 RETREG2Q8NC44 543 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 PPTC7Q8NI37 304 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 ETNPPLQ8TBG4 499 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 FAM20AQ96MK3 541 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 MTMR9Q96QG7 549 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 MTIF3Q9H2K0 278 aaKnown RBP15.11■□□□□ 0.01
MSH6-208ENST00000493177 AGO4Q9HCK5 861 aaKnown RBP15.11■□□□□ 0.01
MSH6-208ENST00000493177 KCNMB3Q9NPA1 279 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 TCEAL9Q9UHQ7 104 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 TANC1Q9C0D5 1861 aa15.11■□□□□ 0.01
MSH6-208ENST00000493177 TRIP12Q14669 1992 aaPredicted RBP15.11■□□□□ 0.01
MSH6-208ENST00000493177 TCHHQ07283 1943 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 SPATA31C2B4DYI2 1134 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 IPO5O00410 1097 aaKnown RBP15.1■□□□□ 0.01
MSH6-208ENST00000493177 TBX3O15119 743 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 MAFGO15525 162 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 GAS7O60861 476 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 RGS20O76081 388 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 ICAM3P32942 547 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 PRPHP41219 470 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 TECP42680 631 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 PSEN2P49810 448 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 EPHB4P54760 987 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 SP4Q02446 784 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 NEDD9Q14511 834 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 ZNF697Q5TEC3 545 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 LRCH2Q5VUJ6 765 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 ARL6IP4Q66PJ3 421 aaKnown RBP15.1■□□□□ 0.01
MSH6-208ENST00000493177 GPR153Q6NV75 609 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 HAS1Q92839 578 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 EMID1Q96A84 441 aaPredicted RBP15.1■□□□□ 0.01
MSH6-208ENST00000493177 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.1■□□□□ 0.01
MSH6-208ENST00000493177 SDF4Q9BRK5 362 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 NOC4LQ9BVI4 516 aaKnown RBP15.1■□□□□ 0.01
MSH6-208ENST00000493177 TEKT3Q9BXF9 490 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 FBXO2Q9UK22 296 aaPredicted RBP15.1■□□□□ 0.01
MSH6-208ENST00000493177 SRPRBQ9Y5M8 271 aaKnown RBP15.1■□□□□ 0.01
MSH6-208ENST00000493177 SCN5AQ14524 2016 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 UMODL1Q5DID0 1318 aa15.1■□□□□ 0.01
MSH6-208ENST00000493177 KAT6AQ92794 2004 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 PRPF40AO75400 957 aaKnown RBP15.09■□□□□ 0.01
MSH6-208ENST00000493177 SEMA3FQ13275 785 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 BFSP2Q13515 415 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 MFSD10Q14728 455 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 PTGISQ16647 500 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 Q7L0L9 218 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 RPUSD2Q8IZ73 545 aaKnown RBP15.09■□□□□ 0.01
MSH6-208ENST00000493177 SLC5A5Q92911 643 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 SCLYQ96I15 445 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 CLIC6Q96NY7 704 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 RAB34Q9BZG1 259 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 TTC12Q9H892 705 aaPredicted RBP15.09■□□□□ 0.01
MSH6-208ENST00000493177 IL23AQ9NPF7 189 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 TBC1D22BQ9NU19 505 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 PCDHA7Q9UN72 937 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 PCDHA12Q9UN75 941 aa15.09■□□□□ 0.01
MSH6-208ENST00000493177 CHMP2AO43633 222 aa15.08■□□□□ 0
MSH6-208ENST00000493177 CUTAO60888 179 aa15.08■□□□□ 0
MSH6-208ENST00000493177 ATP9AO75110 1047 aa15.08■□□□□ 0
MSH6-208ENST00000493177 FGBP02675 491 aa15.08■□□□□ 0
MSH6-208ENST00000493177 GRIN1Q05586 938 aa15.08■□□□□ 0
MSH6-208ENST00000493177 ITGB3BPQ13352 177 aaPredicted RBP15.08■□□□□ 0
MSH6-208ENST00000493177 IL17AQ16552 155 aa15.08■□□□□ 0
MSH6-208ENST00000493177 KIAA0753Q2KHM9 967 aa15.08■□□□□ 0
MSH6-208ENST00000493177 HSDL1Q3SXM5 330 aa15.08■□□□□ 0
MSH6-208ENST00000493177 NCAPH2Q6IBW4 605 aa15.08■□□□□ 0
MSH6-208ENST00000493177 CYFIP1Q7L576 1253 aa15.08■□□□□ 0
MSH6-208ENST00000493177 FAM161BQ96MY7 647 aa15.08■□□□□ 0
MSH6-208ENST00000493177 MORC2Q9Y6X9 1032 aaPredicted RBP15.08■□□□□ 0
MSH6-208ENST00000493177 ZBBXA8MT70 800 aa15.07■□□□□ 0
MSH6-208ENST00000493177 PPFIA4O75335 1185 aa15.07■□□□□ 0
MSH6-208ENST00000493177 KCNA2P16389 499 aa15.07■□□□□ 0
MSH6-208ENST00000493177 MCM4P33991 863 aa15.07■□□□□ 0
MSH6-208ENST00000493177 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 01e-8■■■■■ 31.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms