RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, human

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR4-215	ENST00000492606	NEUROD4	Q9HD90	331 aa		5.19	□□□□□ -1.58
UBR4-215	ENST00000492606	ERVK-5	Q9HDB9	667 aa		5.19	□□□□□ -1.58
UBR4-215	ENST00000492606	LATS2	Q9NRM7	1088 aa		5.19	□□□□□ -1.58
UBR4-215	ENST00000492606	ABI2	Q9NYB9	513 aa	Predicted RBP	5.19	□□□□□ -1.58
UBR4-215	ENST00000492606	ANKMY1	Q9P2S6	941 aa		5.19	□□□□□ -1.58
UBR4-215	ENST00000492606	VTI1B	Q9UEU0	232 aa		5.19	□□□□□ -1.58
UBR4-215	ENST00000492606	PCDHGC4	Q9Y5F7	938 aa		5.19	□□□□□ -1.58
UBR4-215	ENST00000492606	URB1	O60287	2271 aa	Known RBP	5.19	□□□□□ -1.58
UBR4-215	ENST00000492606	OTOG	Q6ZRI0	2925 aa		5.19	□□□□□ -1.58
UBR4-215	ENST00000492606	ATM	Q13315	3056 aa		5.19	□□□□□ -1.58
UBR4-215	ENST00000492606	ELP1	O95163	1332 aa		5.19	□□□□□ -1.58
UBR4-215	ENST00000492606	MAPK8IP3	Q9UPT6	1336 aa		5.19	□□□□□ -1.58
UBR4-215	ENST00000492606	DOCK1	Q14185	1865 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	RARB	P10826	455 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	ERCC5	P28715	1186 aa	Predicted RBP	5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	CRK	P46108	304 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	HERVK_113	P62684	666 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	FKBP1A	P62942	108 aa	Known RBP	5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	GRM2	Q14416	872 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	GRB14	Q14449	540 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	EPC2	Q52LR7	807 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	MEI1	Q5TIA1	1274 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	OLFML2B	Q68BL8	750 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	LRP10	Q7Z4F1	713 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	C1orf210	Q8IVY1	113 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	CCAR1	Q8IX12	1150 aa	Known RBP	5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	CCDC155	Q8N6L0	562 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	C3orf58	Q8NDZ4	430 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	OR13H1	Q8NG92	308 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	SUSD6	Q92537	303 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	JARID2	Q92833	1246 aa	Predicted RBP	5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	RAD9A	Q99638	391 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	TINF2	Q9BSI4	451 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	BCO2	Q9BYV7	579 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	TRPV6	Q9H1D0	765 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	SRA1	Q9HD15	236 aa	Known RBP	5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	MRS2	Q9HD23	443 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	SEMA4G	Q9NTN9	838 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	DBF4	Q9UBU7	674 aa	Predicted RBP	5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	MINPP1	Q9UNW1	487 aa		5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	TTF2	Q9UNY4	1162 aa	Known RBP	5.18	□□□□□ -1.58
UBR4-215	ENST00000492606	NLRC5	Q86WI3	1866 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	LAMA1	P25391	3075 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	ROCK2	O75116	1388 aa	Known RBP	5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	MGA	Q8IWI9	3026 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606		A0A0U1RQG5	324 aa	Predicted RBP	5.17	□□□□□ -1.58
UBR4-215	ENST00000492606		A0A1W2PP55	124 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	MAN1A2	O60476	641 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	LILRB5	O75023	590 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	CNMD	O75829	334 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	PFKM	P08237	780 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	HMOX1	P09601	288 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	ACTN1	P12814	892 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	EPB42	P16452	691 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	TAL1	P17542	331 aa	Predicted RBP	5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	ATF7	P17544	494 aa	Predicted RBP	5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	EIF4B	P23588	611 aa	Known RBP	5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	IL13	P35225	146 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	NDUFV1	P49821	464 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	HMGCS2	P54868	508 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	WDR5	P61964	334 aa	Known RBP	5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	ZNF252P-AS1	Q0IIN9	211 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	CCIN	Q13939	588 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	GRIK5	Q16478	980 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	LPAL2	Q16609	132 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	NAALADL2	Q58DX5	795 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	EFHC2	Q5JST6	749 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	SPECC1	Q5M775	1068 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	PGBD3	Q8N328	593 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	FAM181A	Q8N9Y4	354 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	RNF34	Q969K3	372 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	ZNF837	Q96EG3	531 aa	Predicted RBP	5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	GLT1D1	Q96MS3	346 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	PAGR1	Q9BTK6	254 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	NUCKS1	Q9H1E3	243 aa	Known RBP	5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	ZNF768	Q9H5H4	540 aa	Known RBP	5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	SUV39H2	Q9H5I1	410 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	PICK1	Q9NRD5	415 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	DLGAP2	Q9P1A6	1054 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	KANSL3	Q9P2N6	904 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	GMEB2	Q9UKD1	530 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	KLK13	Q9UKR3	277 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	BARX2	Q9UMQ3	279 aa	Predicted RBP	5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	COL5A1	P20908	1838 aa	Predicted RBP	5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	ZNF236	Q9UL36	1845 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	FN1	P02751	2386 aa	Known RBP	5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	PDZD2	O15018	2839 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	SYNRG	Q9UMZ2	1314 aa		5.17	□□□□□ -1.58
UBR4-215	ENST00000492606	ZBTB42	B2RXF5	422 aa		5.16	□□□□□ -1.58
UBR4-215	ENST00000492606	KHNYN	O15037	678 aa	Known RBP	5.16	□□□□□ -1.58
UBR4-215	ENST00000492606	EFCAB14	O75071	495 aa		5.16	□□□□□ -1.58
UBR4-215	ENST00000492606	COBL	O75128	1261 aa		5.16	□□□□□ -1.58
UBR4-215	ENST00000492606	KIF4A	O95239	1232 aa		5.16	□□□□□ -1.58
UBR4-215	ENST00000492606	GJB5	O95377	273 aa		5.16	□□□□□ -1.58
UBR4-215	ENST00000492606	ACPP	P15309	386 aa		5.16	□□□□□ -1.58
UBR4-215	ENST00000492606	ZNF76	P36508	570 aa		5.16	□□□□□ -1.58
UBR4-215	ENST00000492606	LIMK1	P53667	647 aa		5.16	□□□□□ -1.58
UBR4-215	ENST00000492606	SPP2	Q13103	211 aa		5.16	□□□□□ -1.58
UBR4-215	ENST00000492606	PABPC4	Q13310	644 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
UBR4-215	ENST00000492606	LAMC2	Q13753	1193 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms