RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 INSRRP14616 1297 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 XBP1P17861 261 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 KRT2P35908 639 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 STAT5BP51692 787 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 BFSP2Q13515 415 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 ZNF618Q5T7W0 954 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 FAM109BQ6ICB4 259 aaPredicted RBP8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 PPP4R3AQ6IN85 833 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 ZNF746Q6NUN9 644 aaPredicted RBP8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 SWSAP1Q6NVH7 229 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 MOXD1Q6UVY6 613 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 RUFY4Q6ZNE9 571 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 CCDC60Q8IWA6 550 aaPredicted RBP8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 RETREG2Q8NC44 543 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 CAGE1Q8TC20 777 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 AFAP1L1Q8TED9 768 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 LMBR1Q8WVP7 490 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 HERVK_113Q902F9 699 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 GLG1Q92896 1179 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 ATP6V0A1Q93050 837 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 TMX3Q96JJ7 454 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 UNC45AQ9H3U1 944 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 KCNMB3Q9NPA1 279 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 ERAP1Q9NZ08 941 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 ZNF215Q9UL58 517 aaPredicted RBP8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 NOD1Q9Y239 953 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 MAFBQ9Y5Q3 323 aaPredicted RBP8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 CHD9Q3L8U1 2897 aa8.15□□□□□ -1.11
PDLIM1-204ENST00000492511 NRCAMQ92823 1304 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 CCDC194A0A1B0GVG4 234 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 MBLAC1A4D2B0 266 aaPredicted RBP8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 GRXCR1A8MXD5 290 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 ZBTB42B2RXF5 422 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 CXCL10P02778 98 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 SELPP16109 830 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 GUCY1B3Q02153 619 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 PPFIA1Q13136 1202 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 GRIK4Q16099 956 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 LETM2Q2VYF4 491 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 LRRC8DQ7L1W4 858 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 OTOP2Q7RTS6 562 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 DEFB128Q7Z7B8 93 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 NEK8Q86SG6 692 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 DIS3L2Q8IYB7 885 aaKnown RBP8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 RPUSD2Q8IZ73 545 aaKnown RBP8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 TRAPPC12Q8WVT3 735 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 HAS1Q92839 578 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 RNPC3Q96LT9 517 aaKnown RBP8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 RIT2Q99578 217 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 UPF2Q9HAU5 1272 aaKnown RBP8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 MTMR10Q9NXD2 777 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 DDX25Q9UHL0 483 aaKnown RBP8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 PCDHA10Q9Y5I2 948 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 EYSQ5T1H1 3165 aa8.14□□□□□ -1.11
PDLIM1-204ENST00000492511 MYH7BA7E2Y1 1941 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 DOCK5Q9H7D0 1870 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 POTEB3A0JP26 581 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 EML1O00423 815 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 ST18O60284 1047 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 ZNF862O60290 1169 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 CCNT1O60563 726 aaKnown RBP8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 STBD1O95210 358 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 CHRNA1P02708 482 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 GNAT1P11488 350 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 RFC2P35250 354 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 THPOP40225 353 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 IGBP1P78318 339 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 HMGN5P82970 282 aaKnown RBP8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 SMAD3P84022 425 aaKnown RBP8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 KRT76Q01546 638 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 UGCGQ16739 394 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 FAM26DQ5JW98 314 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 ZNF697Q5TEC3 545 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 LRCH2Q5VUJ6 765 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 MIS18BP1Q6P0N0 1132 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 PSRC1Q6PGN9 363 aaPredicted RBP8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 POTEBQ6S5H4 581 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 Q7L0L9 218 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 RPAINQ86UA6 219 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 SMAP1Q8IYB5 467 aaPredicted RBP8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 CCDC155Q8N6L0 562 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 IL27Q8NEV9 243 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 FBXO18Q8NFZ0 1043 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 AZI2Q9H6S1 392 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 ZNF302Q9NR11 478 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 DISC1Q9NRI5 854 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 GABBR1Q9UBS5 961 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 VAV3Q9UKW4 847 aa8.13□□□□□ -1.11
PDLIM1-204ENST00000492511 IGSF9BQ9UPX0 1349 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 CHD7Q9P2D1 2997 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 RRN3P2A6NIE6 340 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 WDR64B1ANS9 1081 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 RSPH10B2B2RC85 870 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 KIF28PB7ZC32 967 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 BACH1O14867 736 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 CHMP2AO43633 222 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 HBP1O60381 514 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms