RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SCLYQ96I15 445 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 YTHDC1Q96MU7 727 aaKnown RBP4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 WRNIP1Q96S55 665 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 ADOQ96SZ5 270 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 FEZ1Q99689 392 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 CDC6Q99741 560 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 SLC52A2Q9HAB3 445 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 TRIM39Q9HCM9 518 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 FBXL7Q9UJT9 491 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 ZFR2Q9UPR6 939 aaKnown RBP4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 TNFRSF18Q9Y5U5 241 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 CCDC163A0A0D9SF12 145 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 PLD2O14939 933 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 PPP1R11O60927 126 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 RAPGEF3O95398 923 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 SDSP20132 328 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 PTH1RQ03431 593 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 PABPC4Q13310 644 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 TCEA2Q15560 299 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 E4F1Q66K89 784 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 FAM126BQ8IXS8 530 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 RCBTB1Q8NDN9 531 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 DPF3Q92784 378 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 MBD6Q96DN6 1003 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 MMP19Q99542 508 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 MRPL4Q9BYD3 311 aaKnown RBP4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 CDIP1Q9H305 208 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 ZDHHC9Q9Y397 364 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 TRAF6Q9Y4K3 522 aa4.27□□□□□ -1.73
HMGB1P30-201ENST00000492455 RFPL3O75679 317 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 DNAJC8O75937 253 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 STAT5AP42229 794 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 GYS2P54840 703 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 LSM12Q3MHD2 195 aaKnown RBP4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 FNDC3BQ53EP0 1204 aaKnown RBP4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 USP39Q53GS9 565 aaKnown RBP4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 USP53Q70EK8 1073 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 BRAPQ7Z569 592 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 FGD2Q7Z6J4 655 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 NLRP10Q86W26 655 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 SYNPOQ8N3V7 929 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 DCAF4Q8WV16 495 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 NEU4Q8WWR8 484 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 ZNF503Q96F45 646 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 PTPN18Q99952 460 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 PHF20Q9BVI0 1012 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 CROTQ9UKG9 612 aa4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB1P30-201ENST00000492455 C7orf72A4D263 438 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 MEFVO15553 781 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 LTBRP36941 435 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 GABREP78334 506 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 NFATC3Q12968 1075 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 TM4SF20Q53R12 229 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 DPY19L2P1Q6NXN4 242 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 MAMDC2Q7Z304 686 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 MILR1Q7Z6M3 343 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 GIMAP8Q8ND71 665 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 PTPRN2Q92932 1015 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 NINJ1Q92982 152 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 ZSWIM3Q96MP5 696 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 MEGF9Q9H1U4 602 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 GPR27Q9NS67 375 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 MARCH2Q9P0N8 246 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 PPARGC1AQ9UBK2 798 aaKnown RBP4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 SFMBT1Q9UHJ3 866 aa4.25□□□□□ -1.73
HMGB1P30-201ENST00000492455 A0A087X0B3 334 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 SGSM2O43147 1006 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 NARSO43776 548 aaKnown RBP4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 RASGRP1O95267 797 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 KCNA6P17658 529 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 KCNAB2Q13303 367 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 ADAM9Q13443 819 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 ZNF460Q14592 562 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 ABHD17CQ6PCB6 329 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 TRMT10BQ6PF06 316 aaKnown RBP4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 RSPO2Q6UXX9 243 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 RALYLQ86SE5 291 aaKnown RBP4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 DHX37Q8IY37 1157 aaKnown RBP4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 IFNL2Q8IZJ0 200 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 Q8N1Y9 231 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 DIO2Q92813 273 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 TMEM209Q96SK2 561 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 SEC61A2Q9H9S3 476 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 BTG4Q9NY30 223 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 NDOR1Q9UHB4 597 aa4.24□□□□□ -1.73
HMGB1P30-201ENST00000492455 TCRBV16S1A1N1A0A5B0 115 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 ARVCFO00192 962 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 CRTAMO95727 393 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 ADH4P08319 380 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 SLC6A11P48066 632 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 MASP1P48740 699 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 GPR85P60893 370 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 HNRNPA0Q13151 305 aaKnown RBP4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 LBX2Q6XYB7 198 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 THNSL2Q86YJ6 484 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 NIM1KQ8IY84 436 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 GPATCH3Q96I76 525 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms